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snapCGH (version 1.42.0)

filterClones: Filter clones from sample

Description

Function for filtering clones via a user defined function.

Usage

filterClones(MA, filterFunc, ...)

Arguments

MA
An object of class MAList
filterFunc
A user specified function that accepts an MAList and returns the indices of the clones to be removed.
...
Additional arguments to be passed to the filter function.

Details

Any clones identified by the filter function are turned into NA's. These are then removed or imputed within the processCGH function.