find.param.three: Yields output when there are 3 underlying states
Description
This function provides the output (means/variances, transition matrix, likelihood) when the heterogeneous HMM is fitted with three underlying states.
It is a workhorse of the process.data function.
Usage
find.param.three(output.optim,var.fixed)
Arguments
output.optim
The output from fitting a heterogeneous HMM when there are four underlying states
var.fixed
Logical variable - TRUE if you want the variances to be tied across states. Defaults to FALSE
Value
This function outputs the state means/variances, transition matrices, rate parameters, maximised likelihood and convergence information provided
by fitting a heterogeneous HMM with three underlying states.