log2ratios

An object of class <code><a rd-options="limma:malist" href="/link/MAList?package=snapCGH&version=1.42.0&to=limma%3Amalist" data-mini-rdoc="limma:malist::MAList">MAList</a></code> or
    <code><a rd-options="snapCGH:SegList" href="/link/SegList?package=snapCGH&version=1.42.0&to=snapCGH%3ASegList" data-mini-rdoc="snapCGH:SegList::SegList">SegList</a></code>


  This function extracts the log2 ratios from either an
  <code><a rd-options="limma:malist" href="/link/MAList?package=snapCGH&version=1.42.0&to=limma%3Amalist" data-mini-rdoc="limma:malist::MAList">MAList</a></code> object or a <code><a rd-options="snapCGH:SegList" href="/link/SegList?package=snapCGH&version=1.42.0&to=snapCGH%3ASegList" data-mini-rdoc="snapCGH:SegList::SegList">SegList</a></code> object.


datasets

Methods for segmenting, normalising and processing aCGH
data; including plotting functions for visualising raw and
segmented data for individual and multiple arrays.

John Marioni

snapCGH

Segmentation, normalisation and processing of aCGH data.

log2ratios function

An object of class <code><a href="MAList" rd-options="limma:malist">MAList</a></code> or
    <code><a href="SegList" rd-options="snapCGH:SegList">SegList</a></code>

This function extracts the log2 ratios from either an
  <code><a href="MAList" rd-options="limma:malist">MAList</a></code> object or a <code><a href="SegList" rd-options="snapCGH:SegList">SegList</a></code> object.

log2ratios: Extracting log2 ratios

Description

Usage

Arguments