convert.snpMatrix

convert.snpMatrix.dir

object


    A directory containing saved <code>snpMatrix</code> objects
  


    The file extension for files containing such objects
  


These functions convert <code>snpMatrix</code> objects to <code>snpStats</code>
objects. <code>convert.snpMatrix</code> converts a single object, while
<code>convert.snpMatrix.dir</code> converts all stored elements in a specified
directory. They really only change the class names since most of the
classes in <code>snpStats</code> are backwards-compatible with 
<code>snpMatrix</code>. The exception is the <code>ImputationRules</code> class; 
<code>imputation.rules</code> objects will need to be regenerated.


classes

Classes and statistical methods for large SNP association studies. This extends the earlier snpMatrix package, allowing for uncertainty in genotypes.

David Clayton

snpStats

SnpMatrix and XSnpMatrix classes and methods

convert.snpMatrix function

A directory containing saved <code>snpMatrix</code> objects

The file extension for files containing such objects

These functions convert <code>snpMatrix</code> objects to <code>snpStats</code>
objects. <code>convert.snpMatrix</code> converts a single object, while
<code>convert.snpMatrix.dir</code> converts all stored elements in a specified
directory. They really only change the class names since most of the
classes in <code>snpStats</code> are backwards-compatible with 
<code>snpMatrix</code>. The exception is the <code>ImputationRules</code> class; 
<code>imputation.rules</code> objects will need to be regenerated.

convert.snpMatrix: Convert `snpMatrix` objects to `snpStats` objects

Description

Usage

Arguments

Value