sommer (version 4.1.4)

at: at covariance structure

Description

at creates a diagonal covariance structure for specific levels of the random effect.

Usage

at(x, levs)

Arguments

x

vector of observations for the random effect.

levs

levels of the random effect to use for building the incidence matrices.

Value

$res

a list with the provided vector and the variance covariance structure expected.

References

Covarrubias-Pazaran G (2016) Genome assisted prediction of quantitative traits using the R package sommer. PLoS ONE 11(6): doi:10.1371/journal.pone.0156744

See Also

The function vs to know how to use at in the mmer solver.

Examples

# NOT RUN {
x <- as.factor(c(1:5,1:5,1:5));x
at(x)
at(x, c("1","2"))
# }