Learn R Programming

sonicscrewdriver (version 0.0.7)

Bioacoustic Analysis and Publication Tools

Description

Provides tools for manipulating sound files for bioacoustic analysis, and preparing analyses these for publication. The package validates that values are physically possible wherever feasible.

Copy Link

Version

Install

install.packages('sonicscrewdriver')

Monthly Downloads

3,282

Version

0.0.7

License

GPL-3

Issues

Pull Requests

Stars

Forks

Repository

https://github.com/edwbaker/SonicScrewdriveR

Homepage

https://sonicscrewdriver.ebaker.me.uk

Maintainer

Ed Baker

Last Published

May 11th, 2024

Functions in sonicscrewdriver (0.0.7)

Analyse sound files using BirdNET-Analyzer

Computes a beat spectrum

audioblastDownload

Download audio files from audioBlast

audiomothConfig

Read AudioMoth configuration file

Convert bits to bytes

Apply a function to all channels of a Wave or WaveMC object

Create a new Annotation object

convert2Fahrenheit

Convert temperature to Fahrenheit

convert2Celsius

Convert temperature to Celsius

convert2dyne_cm2

Convert pressure to dyne per square centimetre

convert2radians

Convert angle to radians

convert2degrees

Convert angle to degrees

convert2seconds

Convert time to seconds

Channels for sound ecology

Install the BirdNET environment

Calculate the fraction of a day given by a value

Simple bandpass filter

Automatic Band Pass Filter

Circularise a dataset

Cut wave by samples

Concatenate two or more Wave-like objects.

Add a process to a Tagged Wave or WaveMC object

Create Default Cluster for Windowing

Generate labels for a diel plot

Convert temperature to Kelvin

convert2Pascals

Convert pressure to Pascals

Beat spectrum complexity

Add two spectra from seewave

Various measurements of frequency values for a Wave object

generateTimeShift

Generated time-shifted versions of a Wave-like object

Apply a WaveFilter object to a Wave object

Various measurements of frequency values for a Wave object

Calculate the jitter in a Wave object

Correlate channels in a WaveMC object

Get the frequency from wavelength and speed of sound

naturalFrequency

Calculate the natural frequency

Create a diel plot

Calculate the duty cycle of a wave

Pad labels with interval

+,PseudoWave,numeric-method

PseudoWave scalar addition

Google Speech API Transcribe

Create a PseudoWave object

Normalise a Wave object

Create an empty yearly plot

Pulse detection

rainfallDetection

Rainfall detection

Plot a radial polygon

Short term energy

+,numeric,PseudoWave-method

Numeric addition by PseudoWave

Generate positions of labels for a diel plot

Convert data into a Wave object

Sample duration

Create an empty diel plot

Plot rings on a diel plot

Pulse intervals

Read an audio file

readAudacityLabels

Read an Audacity label file

Generate a single pulse

Specify a region with a file to analyse

sheepFrequencyStats

Sheep frequencyStats

Add noise to a Wave like object

referenceIntensity

Reference intensity

generateTimeMask

Generate time masked Wave-like objects

Converts bytes in human readable form

Map three vectors to RGB

Combines labels which overlap into single continuous regions

pd_dietrich2004

Pulse detection using Dietrich (2004)

[,Wave,TimeRegion-method

Allow subsetting a Wave object with a TimeRegion

Converts time to human readable form

*,numeric,PseudoWave-method

Numeric multiplication by PseudoWave

*,PseudoWave,numeric-method

PseudoWave scalar manipulation

referencePressure

Reference pressure

/,PseudoWave,numeric-method

PseudoWave scalar division

Generate a sine sweep

subtractSpectra

Subtract two spectra from seewave

Calculate the shimmer in a Wave object

resonantFrequency

Calculate the resonant frequency

yearlyPositions

Generate positions of labels for a yearly plot

Converts a timezone offset into a rotation

Create a yearly plot

Check an object is a Wave object

Windowing Function for Wave Objects

Generate labels for a yearly plot

Typical volumes

Simplified pulse detection using Dietrich (2004)

Natural Time Domain

Read output files from BirdNet Analyser

The radar equation

Parse a filename

Calculate the speed of sound in a medium

Calculate and plot statistics on a frequency spectrum

Untag a TaggedWave or TaggedWaveMC object

Upsample a wave

writeAudacityLabels

Write an Audacity label file

Samples per time period

Tag a Wave or WaveMC object

Read a file from Seeed Studio Respeaker 6 mic array

Identify zero crossings in a Wave object

Calculate the fraction of a year given by a value

TimeRegion-class

An S4 class to represent a TimeRegion within a Wave object.

STP: Standard Temperature and Pressure

Convert text times of day in audioblast traits to numeric values

PseudoWave-class

An S4 class to represent a PseudoWave object that is converted to a Wave object when operated on.

ab_seqss_nearestStart

Nearest start time

TaggedWave-class

A S4 class for tagged waves

-,PseudoWave,numeric-method

PseudoWave scalar subtraction

TaggedWaveMC-class

A S4 class for tagged multi-channel waves

Annotation-class

A S4 class for annotations

WaveFilter-class

WaveFilter object for audio filters

Read AudioMoth metadata from a wave file

Get data or analyses from audioBlast

Calculated size of raw audio files