Processes either the CSV file generated by lhc_process_sample_run_subsets or one that has been supplied, going through each line of that file and generating a file that summarises simulation responses under each parameter set. This CSV file, named as specified by parameter LHCSUMMARYFILENAME, will contain one row for each parameter set, accompanied by the median of all the responses contained in the LHC_ALL_SIM_RESULTS_FILE. This method can also be performed for a number of simulation timepoints
lhc_generateLHCSummary(FILEPATH, PARAMETERS, MEASURES,
LHC_ALL_SIM_RESULTS_FILE, LHCSUMMARYFILENAME,
SPARTAN_PARAMETER_FILE = NULL, TIMEPOINTS = NULL,
TIMEPOINTSCALE = NULL, check_done = FALSE, write_csv_file = TRUE)Directory where the simulation runs of single CSV file can be found
Array containing the names of the parameters of which parameter samples will be generated
Array containing the names of the output measures which are used to analyse the simulation
If lhc_process_sample_run_subsets is used (i.e. results processed by folder structure), this will contain the output of that method. If specifying responses using a single CSV file, this will contain the name of that file (which should be in the FILEPATH folder).
Name of the LHC Summary file to be generated. Contains each parameter set alongside the result gained when the simulation was run under that criteria.
Location of the file output by the latin-hypercube sampling method (list of parameters). Note if providing a single CSV file with parameter/response pairings, you do not need to provide this file, and can thus enter this parameter as NULL.
Implemented so this method can be used when analysing multiple simulation timepoints. If only analysing one timepoint, this should be set to NULL. If not, this should be an array of timepoints, e.g. c(12,36,48,60)
Implemented so this method can be used when analysing multiple simulation timepoints. Sets the scale of the timepoints being analysed, e.g. "Hours"
If using multiple timepoints, whether data entry has been checked
Whether the analysis should be written to CSV file. Used with spartanDB, where results are submitted to analysis database