specLSet-class

show,specLSet-method

summary,specLSet-method

plot

plot,specLSet-method

merge.specLSet

merge.specLSet,specLSet-method

write.spectronaut,specLSet-method

ionlibrary

ionlibrary,specLSet-method

rt.input

rt.input,specLSet-method

rt.normalized

rt.normalized,specLSet-method

generate.consensus

generate.consensus,specLSet-method

getProteinPeptideTable

getProteinPeptideTable,specLSet-method

This class is used to store, show, and write 
    generated results of the package.

classes

specL provides a function for generating spectra libraries
        which can be used for MRM SRM MS workflows in proteomics. The
        package provides a BiblioSpec reader, a function which can add
        the protein information using a FASTA formatted amino acid
        file, and an export method for using the created library in the
        Spectronaut software.

Christian Panse

specL

specL - Prepare Peptide Spectrum Matches for Use in Targeted
        Proteomics

specLSet-class function

Objects can be created by calls of the form <code>new("specLSet", ...)</code>.

Objects from the Class

Class <code>"specLSet"</code>

specLSet-class: Class `"specLSet"`

Description

Arguments

Objects from the Class

See Also

Examples