prepareCuffExample: Prepare the Cufflinks example data

Description

Prepare the Cufflinks example data set.

Usage

prepareCuffExample()

Arguments

Value

A CuffSet object.

Details

This helper function prepares the Cufflinks example dataset, including the example GTF-file.

References

Vitting-Seerup K , Porse BT, Sandelin A, Waage J. (2014) spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data. BMC Bioinformatics 15:81.

Examples

Run this code

#Load cufflinks example data
cuffDB <- prepareCuffExample()

Run the code above in your browser using DataLab