stacomiR (version 0.6.1)

fungraph: Function for report_mig graphs including numbers DF DC operations

Description

This graph is for species other than glass eel

Usage

fungraph(
  report_mig,
  tableau,
  time.sequence,
  taxa,
  stage,
  dc = NULL,
  silent,
  color = NULL,
  color_ope = NULL,
  ...
)

Value

No return value, called for side effects

Arguments

report_mig

An object of class report_mig

tableau

A data frame with the with the following columns : No.pas,debut_pas,fin_pas, ope_dic_identifiant,lot_tax_code,lot_std_code,type_de_quantite,MESURE,CALCULE, EXPERT,PONCTUEL,Effectif_total,taux_d_echappement,coe_valeur_coefficient

time.sequence

A vector POSIXt

taxa

The species

stage

The stage

dc

The DC

silent

Message displayed or not

color

Default NULL, a vector of color in the following order, working, stopped, 1...5 types of operation for the fishway or DC, measured, calculated, expert, direct observation. If null will be set to brewer.pal(12,"Paired")[c(8,10,4,6,1,2,3,5,7)]

color_ope

Default NULL, a vector of color for the operations. Default to brewer.pal(4,"Paired")

...

additional parameters passed to matplot, main, ylab, ylim, lty, pch, bty, cex.main, it is currenly not a good idea to change xlim (numbers are wrong, the month plot covers all month, and legend placement is wrong

Author

Cedric Briand