r_mig

This dataset corresponds to the data collected at the vertical slot fishway
in 2012, video recording marine lamprey migration

data

Graphical outputs and treatment for a database of fish pass
monitoring. It is a part of the 'STACOMI' open source project developed in
France by the French Office for Biodiversity institute to centralize
data obtained by fish pass monitoring. This version is available in French and
English. See <http://stacomir.r-forge.r-project.org/> for more information on
'STACOMI'.

Cedric Briand

stacomiR

Fish Migration Monitoring

Marion Legrand

Beaulaton Laurent

Boulenger Clarisse

Lafage Denis

Grall Sebastien

r_mig function

An object of class report_mig with 8 slots:<dl>
 <dt>dc</dt>
<dd>the <code>ref_dc</code> object with 4 slots filled with data corresponding to the iav postgres schema</dd> <dt>taxa</dt>
<dd>the <code>ref_taxa</code> the taxa selected</dd> <dt>stage</dt>
<dd>the <code>ref_stage</code> the stage selected</dd> <dt>timestep</dt>
<dd>the <code>ref_timestep_daily</code> calculated for all 2015</dd> <dt>data</dt>
<dd>A dataframe with 10304 rows and 11 variables<dl>
 <dt>ope_identifiant</dt>
<dd>operation id</dd></dl></dd> <dt>lot_identifiant</dt>
<dd>sample id</dd> <dt>lot_identifiant</dt>
<dd>sample id</dd> <dt>ope_dic_identifiant</dt>
<dd>dc id</dd> <dt>lot_tax_code</dt>
<dd>species id</dd> <dt>lot_std_code</dt>
<dd>stage id</dd> <dt>value</dt>
<dd>the value</dd> <dt>type_de_quantite</dt>
<dd>either effectif (number) or poids (weights)</dd> <dt>lot_dev_code</dt>
<dd>destination of the fishes</dd> <dt>lot_methode_obtention</dt>
<dd>method of data collection, measured, calculated...</dd>
 
 
</dl> <dt>coef_conversion</dt>
<dd>A data frame with 0 observations : no quantity are reported for video recording of mullets, only numbers</dd> <dt>time.sequence</dt>
<dd>A time sequence generated for the report, used internally</dd>

Format

Video counting of Marine lamprey (Petromyzon marinus) in 2012 in the Vilaine (France) — r_mig

An object of class report_mig with 8 slots:<dl>
 <dt>dc</dt>
<dd>the <code>ref_dc</code> object with 4 slots filled with data corresponding to the iav postgres schema</dd>

 <dt>taxa</dt>
<dd>the <code>ref_taxa</code> the taxa selected</dd>

 <dt>stage</dt>
<dd>the <code>ref_stage</code> the stage selected</dd>

 <dt>timestep</dt>
<dd>the <code>ref_timestep_daily</code> calculated for all 2015</dd>

 <dt>data</dt>
<dd>A dataframe with 10304 rows and 11 variables<dl>
 <dt>ope_identifiant</dt>
<dd>operation id</dd>

 <dt>lot_identifiant</dt>
<dd>sample id</dd>

 <dt>lot_identifiant</dt>
<dd>sample id</dd>

 <dt>ope_dic_identifiant</dt>
<dd>dc id</dd>

 <dt>lot_tax_code</dt>
<dd>species id</dd>

 <dt>lot_std_code</dt>
<dd>stage id</dd>

 <dt>value</dt>
<dd>the value</dd>

 <dt>type_de_quantite</dt>
<dd>either effectif (number) or poids (weights)</dd>

 <dt>lot_dev_code</dt>
<dd>destination of the fishes</dd>

 <dt>lot_methode_obtention</dt>
<dd>method of data collection, measured, calculated...</dd>
 
 
</dl></dd>

 <dt>coef_conversion</dt>
<dd>A data frame with 0 observations : no quantity are reported for video recording of mullets, only numbers</dd>

 <dt>time.sequence</dt>
<dd>A time sequence generated for the report, used internally</dd>


</dl>

r_mig: Video counting of Marine lamprey (Petromyzon marinus) in 2012 in the Vilaine (France)

Description

Usage

Arguments

Format