strataG (version 1.0.5)

mega: Read and Write MEGA

Description

Read and write MEGA formatted files.

Usage

read.mega(file)
write.mega(g, file = NULL, label = NULL, line.width = 60, locus = 1)

Arguments

file

a MEGA-formatted file of sequences.

g

a gtypes object.

label

label for MEGA filename (.meg). If NULL, the gtypes description is used if present.

line.width

width of sequence lines.

locus

number or name of locus to write.

Value

for read.mega, a list of:

References

Sudhir Kumar, Glen Stecher, and Koichiro Tamura (2015) MEGA7: Molecular Evolutionary Genetics Analysis version 7.0. Molecular Biology and Evolution (submitted). Available at: http://www.megasoftware.net