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survival (version 2.34-1)

Survival analysis, including penalised likelihood.

Description

survival analysis: descriptive statistics, two-sample tests, parametric accelerated failure models, Cox model. Delayed entry (truncation) allowed for all models; interval censoring for parametric models. Case-cohort designs.

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Version

Install

install.packages('survival')

Monthly Downloads

132,377

Version

2.34-1

License

GPL-2

Maintainer

Thomas Lumley

Last Published

June 5th, 2024

Functions in survival (2.34-1)

lung

Mayo Clinic Lung Cancer Data
is.ratetable

Verify that an Object is of Class `ratetable'
clogit

Conditional logistic regression
ridge

Ridge regression
survdiff

Test Survival Curve Differences
plot.survfit

Plot Method for `survfit'
residuals.survreg

Compute Residuals for `survreg' Objects
survfit

Compute a Survival Curve for Censored Data
survival-internal

Internal survival functions
lines.survfit

Add Lines or Points to a Survival Plot
date.ddmmmyy

Format a Julian date
cluster

Identify Clusters
attrassign

Create new-style "assign" attribute
survreg.control

Package options for survreg and coxph
cch

Fits proportional hazards regression model to case-cohort data
residuals.coxph

Calculate Residuals for a `coxph' Fit
untangle.specials

Help Process the `specials' Argument of the `terms' Function.
date.mmddyyyy

Format a Julian date
heart

Stanford Heart Transplant data
survexp.fit

Work Function to Compute Expected Survival
Surv

Create a Survival Object
date.mmddyy

Format a Julian date
survSplit

Split a survival data set at specified times
nwtco

Data from the National Wilm's Tumor Study
survreg.distributions

Parametric Survival Distributions
veteran

Veterans' Administration Lung Cancer study
coxph.object

Proportional Hazards Regression Object
mdy.date

Convert to Julian Dates
survobrien

O'Brien's Test for Association of a Single Variable with Survival
coxph.detail

Details of a Cox Model Fit
pbc

Mayo Clinic Primary Biliary Cirrhosis Data
survreg.object

Parametric Survival Model Object
stanford2

More Stanford Heart Transplant data
plot.cox.zph

Graphical Test of Proportional Hazards
predict.coxph

Predictions for Cox model
kidney

Kidney data from survival5
ratetables

Census Data Sets for the Expected Survival and Person Years Functions
ovarian

Ovarian Cancer Survival Data
tobin

Tobin's Tobit data
summary.survfit

Summary of a Survival Curve
survfit.object

Survival Curve Object
as.date

Coerce Data to Dates
cox.zph

Test the Proportional Hazards Assumption of a Cox Regression
date.object

Date Objects
colon

Chemotherapy for Stage B/C colon cancer
rats

Rat data from survival5
aml

Acute Myelogenous Leukemia survival data
bladder

Bladder Cancer Recurrences
tcut

Factors for person-year calculations
date.mdy

Convert from Julian Dates to Month, Day, and Year
frailty

(Approximate) Frailty models
pyears

Person Years
strata

Identify Stratum Variables
survreg.old

Old (survival4) Regression for a parametric survival model
coxph

Fit Proportional Hazards Regression Model
survexp

Compute Expected Survival
predict.survreg

Predicted Values for a `survreg' Object
pspline

Penalised smoothing splines
ratetable

Ratetable reference in formula
survreg

Regression for a Parametric Survival Model
anova.coxph

Analysis of Deviance for Cox model.
print.survfit

Print a Short Summary of a Survival Curve