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survival (version 2.37-4)

Survival Analysis

Description

survival analysis: descriptive statistics, two-sample tests, parametric accelerated failure models, Cox model. Delayed entry (truncation) allowed for all models; interval censoring for parametric models. Case-cohort designs.

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Version

Install

install.packages('survival')

Monthly Downloads

116,731

Version

2.37-4

License

LGPL (>= 2)

Maintainer

Terry Therneau

Last Published

March 27th, 2013

Functions in survival (2.37-4)

basehaz

Compute the baseline survival curve for a Cox model
strata

Identify Stratification Variables
coxph.control

Ancillary arguments for controling coxph fits
cox.zph

Test the Proportional Hazards Assumption of a Cox Regression
kidney

Kidney catheter data
coxph.object

Proportional Hazards Regression Object
ovarian

Ovarian Cancer Survival Data
untangle.specials

Help Process the `specials' Argument of the `terms' Function.
nwtco

Data from the National Wilm's Tumor Study
mgus

Monoclonal gammapothy data
survfit.coxph

Compute a Survival Curve from a Cox model
summary.survexp

Summary function for a survexp object
cgd

Chronic Granulotomous Disease data
aareg

Aalen's additive regression model for censored data
residuals.coxph

Calculate Residuals for a `coxph' Fit
aml

Acute Myelogenous Leukemia survival data
print.summary.survfit

Print Survfit Summary
survfit

Create survival curves
colon

Chemotherapy for Stage B/C colon cancer
pbcseq

Mayo Clinic Primary Biliary Cirrhosis, sequential data
survreg.control

Package options for survreg and coxph
ratetable

Ratetable reference in formula
pyears

Person Years
predict.coxph

Predictions for a Cox model
attrassign

Create new-style "assign" attribute
cch

Fits proportional hazards regression model to case-cohort data
print.aareg

Print an aareg object
print.summary.coxph

Print method for summary.coxph objects
pspline

Smoothing splines using a pspline basis
lines.survfit

Add Lines or Points to a Survival Plot
quantile.survfit

Quantiles from a survfit object
survreg

Regression for a Parametric Survival Model
clogit

Conditional logistic regression
print.survfit

Print a Short Summary of a Survival Curve
ridge

Ridge regression
ratetables

Census Data Sets for the Expected Survival and Person Years Functions
residuals.survreg

Compute Residuals for `survreg' Objects
survreg.object

Parametric Survival Model Object
ratetableDate

Convert date objects to ratetable form
survexp.fit

Compute Expected Survival
tt

Mark time tranform terms
survival-internal

Internal survival functions
survobrien

O'Brien's Test for Association of a Single Variable with Survival
survregDtest

Verify a survreg distribution
tobin

Tobin's Tobit data
dsurvreg

Distributions available in survreg.
pbc

Mayo Clinic Primary Biliary Cirrhosis Data
survdiff

Test Survival Curve Differences
model.frame.coxph

Model.frame method for coxph objects
survfitcoxph.fit

A direct interface to the `computational engine' of survfit.coxph
summary.survfit

Summary of a Survival Curve
stanford2

More Stanford Heart Transplant data
heart

Stanford Heart Transplant data
Surv

Create a Survival Object
rats

Rat treatment data from Mantel et al
plot.survfit

Plot method for survfit objects
bladder

Bladder Cancer Recurrences
cluster

Identify clusters.
anova.coxph

Analysis of Deviance for a Cox model.
predict.survreg

Predicted Values for a `survreg' Object
model.matrix.coxph

Model.matrix method for coxph models
lung

NCCTG Lung Cancer Data
plot.aareg

Plot an aareg object.
print.summary.survexp

Print Survexp Summary
coxph

Fit Proportional Hazards Regression Model
rats2

Rat data from Gail et al.
is.ratetable

Verify that an object is of class ratetable.
summary.coxph

Summary method for Cox models
survreg.distributions

Parametric Survival Distributions
frailty

Random effects terms
survConcordance

Compute a concordance measure.
survfit.object

Survival Curve Object
survexp

Compute Expected Survival
survSplit

Split a survival data set at specified times
tcut

Factors for person-year calculations
survfit.formula

Compute a Survival Curve for Censored Data
uspop2

Projected US Population
plot.cox.zph

Graphical Test of Proportional Hazards
veteran

Veterans' Administration Lung Cancer study
logan

Data from the 1972-78 GSS data used by Logan
coxph.detail

Details of a Cox Model Fit
summary.aareg

Summarize an aareg fit