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svapls (version 1.4)

hidden_fac.dat: A gene expression data affected by a hidden variable.

Description

The dataset contains the log transformed expression levels of 500 genes over 20 subjects distributed equally between two varieties 1 and 2. The data is affected by the unknown effects from a hidden confounder whose effect changes over the two sample varieties.

Usage

data(hidden_fac.dat)

Arguments

Format

A data frame with 500 observations on the following 20 variables.
S1
a numeric vector
S2
a numeric vector
S3
a numeric vector
S4
a numeric vector
S5
a numeric vector
S6
a numeric vector
S7
a numeric vector
S8
a numeric vector
S9
a numeric vector
S10
a numeric vector
S11
a numeric vector
S12
a numeric vector
S13
a numeric vector
S14
a numeric vector
S15
a numeric vector
S16
a numeric vector
S17
a numeric vector
S18
a numeric vector
S19
a numeric vector
S20
a numeric vector

Examples

Run this code
data(hidden_fac.dat)
## maybe str(hidden_fac.dat) ; plot(hidden_fac.dat) ...

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