The function geneDel
returns the fluxes which are effected by a
particular combination of genes.
geneDel(model, genes, checkId = FALSE)
An object of class modelorg
.
A vector of character strings of gene id's used in model
, or an
integer vector with indices to gene id's in allGenes(model)
.
Boolean. If set to TRUE
, argument genes
will be checked wether
it fits to model
(e.g. are all genes existing). If set to
FALSE
, genes
must contain indices of gene id's in
model
, e.g. in calls from optimizer
.
An numeric vector of pointers to reaction id's in model
or NULL
,
if no fluxes are effected by the gene deletion.
The function geneDel
checks for a set of gene id's in gene
on which fluxes a deletion of this set of genes has an effect.
Edwards, J. S., Ibarra, R. U. and Palsson, B. <U+00D8>. (2001) In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data. Nat Biotechnol 19, 125--130.