Generates a quick overview of results of simulations stored in objects
of class '>optsol.
summaryOptsol(opt, mod, perc = 1, tol = SYBIL_SETTINGS("TOLERANCE"))A single numeric value in between zero and one indicating how close a flux
value has to reach a flux boundary in order to be called “limiting”,
see Details below.
Default: 1.
A tolerance value, see Details below.
Default: SYBIL_SETTINGS("TOLERANCE").
An object of class '>summaryOptsol if a flux distribution
exists in argument opt, otherwise a summary of the
objective values (mod_obj) is returned.
The function summaryOptsol generates a summary of the simulations
resulting in the object given in argument opt. Both model id's, of
the '>optsol object and of the
'>modelorg object must be identical. The resulting object
of class '>summaryOptsol contains information about the
number of zeros and non-zeros in the flux distribution, the substrates and
products and about the limiting reactions.
A reaction \(i\) is called “limiting”, if its flux value \(v_i\) is non-zero: \(|v_i| > \mathit{tol}\) and if its flux value hits the flux boundaries: \(v_i \leq v_{i,\textrm{min}} \cdot \mathit{perc} \lor v_i \geq v_{i,\textrm{max}} \cdot \mathit{perc}\).