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sybil (version 2.2.0)

deadEndMetabolites-methods: Identify Dead End Metabolites

Description

Search a metabolic network for metabolites, which are produced, but not consumed and vice versa.

Usage

# S4 method for modelorg
deadEndMetabolites(object,retIds)

Arguments

object

An object of class '>modelorg.

retIds

Boolean. If set to TRUE, a list containing metabolite id's will be returned, otherwise a list of logical vectors. Default: TRUE.

Value

A list will be returned:

dem

dead end metabolites

der

reactions containing dead end metabolites

Methods

signature(object = "modelorg")

method to use with class '>modelorg.

See Also

Class '>modelorg and readTSVmod.