Learn R Programming

sybilSBML

SBML (Systems Biology Markup Language) integration in sybil

Copy Link

Version

Install

install.packages('sybilSBML')

Monthly Downloads

153

Version

3.1.2

License

GPL-3 | file LICENSE

Maintainer

Mayo Roettger

Last Published

March 28th, 2020

Functions in sybilSBML (3.1.2)

getSBMLunitDefinitionsList

Get Unit Definitions List
getSBMLmodNotes

Get Model Note
validateSBMLdocument

Validate SBML
versionLibSBML

Get libSBML Version
getSBMLmodName

Get Model Name
sbmlPtr-class

Class "sbmlPtr"
sbmlError-class

Class "sbmlError"
delSBMLmodel

Delete Pointer to SBML Model
getSBMLmodel

Get SBML Model
getSBMLversion

Get SBML Version
isAvailableFbcPlugin

Check for libSBML FBC plugin
isAvailableGroupsPlugin

Check for libSBML Groups plugin
writeSBML

Exports a Metabolic Network in SBML Format
getSBMLnumSpecies

Get Number of Species
getSBMLnumReactions

Get Number of Reactions
getSBMLnumCompart

Get Number of Compartments
openSBMLfile

Open SBML File
readSBMLmod

Reads a Metabolic Network in SBML Format
getSBMLReactionsList

Get Reaction List
getSBMLmodId

Get Model Id
getSBMLCompartList

Get Compartment List
getSBMLmodAnnotation

Get Model Annotation
closeSBMLfile

Close SBML File
getSBMLerrors

Get SBML Errors
getSBMLlevel

Get SBML Level
getSBMLFbcversion

Get SBML Version
getSBMLSpeciesList

Get Species List