optim_thresh_kap_max

This is an internal function returns the threshold to turn probabilities into
binary classes to maximise kappa

internal

Fit species distribution models (SDMs) using the 'tidymodels' framework,
which provides a standardised interface to define models and process their
outputs. 'tidysdm' expands 'tidymodels' by providing methods for spatial objects,
models and metrics specific to SDMs,
as well as a number of specialised functions to process occurrences
for contemporary and palaeo datasets. The full
functionalities of the package are described
in Leonardi et al. (2023) <doi:10.1101/2023.07.24.550358>.

Andrea Manica

tidysdm

Species Distribution Models with Tidymodels

Michela Leonardi

Margherita Colucci

Andrea Vittorio Pozzi

Eleanor M.L. Scerri

Ben Tupper

optim_thresh_kap_max function

<dl><dt>presences</dt>
<dd>Probabilities for presences.</dd>
<dt>absences</dt>
<dd>Provabilities for absences</dd></dl>

Arguments

Find threshold that maximises Kappa — optim_thresh_kap_max

<dl>

<dt>presences</dt>
<dd>Probabilities for presences.</dd>


<dt>absences</dt>
<dd>Provabilities for absences</dd>

</dl>

optim_thresh_kap_max: Find threshold that maximises Kappa

Description

Usage

Value

Arguments