uavRst (version 0.5-2)

get_traindata: Extracts training data from a raster stack using vector data as a mask.

Description

Extracts training data from a raster stack and returns a dataframe containing for each pixel all values.

Usage

get_traindata(rasterStack = NULL, trainPlots = NULL)

Arguments

rasterStack

an object of rasterstack*. containing image data to make prediction on

trainPlots

an object of SpatialPolygonDataFrame*. providing the training areas

Examples

# NOT RUN {
##- required packages
require(uavRst)
setwd(tempdir())

##- get the tutorial data
utils::download.file("https://github.com/gisma/gismaData/raw/master/uavRst/data/tutorial_data.zip",
                     "tutorial_data.zip")
unzip("tutorial_data.zip",exdir =  ".")

##- get the files
imageTrainStack <- list()
geomTrainStack <- list()
imageTrainFiles <- Sys.glob("rgb??.tif")
geomTrainFiles <- Sys.glob("rgb??.shp")

##- create stacks from image and geometry files
imageTrainStack<-lapply(imageTrainFiles, FUN=raster::stack)
geomTrainStack  <- lapply(geomTrainFiles, FUN=raster::shapefile)
names(imageTrainStack[[1]])<-c("red","green","blue")
names(imageTrainStack[[2]])<-c("red","green","blue")
names(imageTrainStack[[3]])<-c("red","green","blue")

##' finally extraxt the training data to a data frame
trainDF <- get_traindata(rasterStack  = imageTrainStack,
                        trainPlots = geomTrainStack)

##- have a look at the training data
head(trainDF)
# }