kmers_of

vkmers_of

the size of the substrings, an integer

Return the k-mers (substrings of size <code>k</code>) of the string <code>x</code>, or
return the string <code>x</code> itself if it is shorter than k.

For each string in a set of strings, determine a unique tag that is a substring of fixed size k unique to that string, if it has one. If no such unique substring exists, the least frequent substring is used. If multiple unique substrings exist, the lexicographically smallest substring is used. This lexicographically smallest substring of size k is called the "UniqTag" of that string.

Shaun Jackman

uniqtag

Abbreviate Strings to Short, Unique Identifiers

kmers_of function

<ul>
<li><code>kmers_of</code>: Return the k-mers of the string <code>x</code>.</li>
<li><code>vkmers_of</code>: Return the k-mers of the strings <code>xs</code>.</li>
</ul>

kmers_of: Return the k-mers of a string.

Description

Usage

Arguments

Value

Functions