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utils (version 3.6.0)

data: Data Sets

Description

Loads specified data sets, or list the available data sets.

Usage

data(…, list = character(), package = NULL, lib.loc = NULL,
     verbose = getOption("verbose"), envir = .GlobalEnv,
     overwrite = TRUE)

Arguments

literal character strings or names.

list

a character vector.

package

a character vector giving the package(s) to look in for data sets, or NULL.

By default, all packages in the search path are used, then the data subdirectory (if present) of the current working directory.

lib.loc

a character vector of directory names of R libraries, or NULL. The default value of NULL corresponds to all libraries currently known.

verbose

a logical. If TRUE, additional diagnostics are printed.

envir

the environment where the data should be loaded.

overwrite

logical: should existing objects of the same name in envir be replaced?

Value

A character vector of all data sets specified (whether found or not), or information about all available data sets in an object of class "packageIQR" if none were specified.

Good practice

There is no requirement for data(foo) to create an object named foo (nor to create one object), although it much reduces confusion if this convention is followed (and it is enforced if datasets are lazy-loaded).

data() was originally intended to allow users to load datasets from packages for use in their examples, and as such it loaded the datasets into the workspace .GlobalEnv. This avoided having large datasets in memory when not in use: that need has been almost entirely superseded by lazy-loading of datasets.

The ability to specify a dataset by name (without quotes) is a convenience: in programming the datasets should be specified by character strings (with quotes).

Use of data within a function without an envir argument has the almost always undesirable side-effect of putting an object in the user's workspace (and indeed, of replacing any object of that name already there). It would almost always be better to put the object in the current evaluation environment by data(…, envir = environment()). However, two alternatives are usually preferable, both described in the ‘Writing R Extensions’ manual.

  • For sets of data, set up a package to use lazy-loading of data.

  • For objects which are system data, for example lookup tables used in calculations within the function, use a file R/sysdata.rda in the package sources or create the objects by R code at package installation time.

A sometimes important distinction is that the second approach places objects in the namespace but the first does not. So if it is important that the function sees mytable as an object from the package, it is system data and the second approach should be used. In the unusual case that a package uses a lazy-loaded dataset as a default argument to a function, that needs to be specified by ::, e.g., survival::survexp.us.

Warning

This function creates objects in the envir environment (by default the user's workspace) replacing any which already existed. data("foo") can silently create objects other than foo: there have been instances in published packages where it created/replaced .Random.seed and hence change the seed for the session.

Details

Currently, four formats of data files are supported:

  1. files ending .R or .r are source()d in, with the R working directory changed temporarily to the directory containing the respective file. (data ensures that the utils package is attached, in case it had been run via utils::data.)

  2. files ending .RData or .rda are load()ed.

  3. files ending .tab, .txt or .TXT are read using read.table(…, header = TRUE, as.is=FALSE), and hence result in a data frame.

  4. files ending .csv or .CSV are read using read.table(…, header = TRUE, sep = ";", as.is=FALSE), and also result in a data frame.

If more than one matching file name is found, the first on this list is used. (Files with extensions .txt, .tab or .csv can be compressed, with or without further extension .gz, .bz2 or .xz.)

The data sets to be loaded can be specified as a set of character strings or names, or as the character vector list, or as both.

For each given data set, the first two types (.R or .r, and .RData or .rda files) can create several variables in the load environment, which might all be named differently from the data set. The third and fourth types will always result in the creation of a single variable with the same name (without extension) as the data set.

If no data sets are specified, data lists the available data sets. It looks for a new-style data index in the Meta or, if this is not found, an old-style 00Index file in the data directory of each specified package, and uses these files to prepare a listing. If there is a data area but no index, available data files for loading are computed and included in the listing, and a warning is given: such packages are incomplete. The information about available data sets is returned in an object of class "packageIQR". The structure of this class is experimental. Where the datasets have a different name from the argument that should be used to retrieve them the index will have an entry like beaver1 (beavers) which tells us that dataset beaver1 can be retrieved by the call data(beaver).

If lib.loc and package are both NULL (the default), the data sets are searched for in all the currently loaded packages then in the data directory (if any) of the current working directory.

If lib.loc = NULL but package is specified as a character vector, the specified package(s) are searched for first amongst loaded packages and then in the default library/ies (see .libPaths).

If lib.loc is specified (and not NULL), packages are searched for in the specified library/ies, even if they are already loaded from another library.

To just look in the data directory of the current working directory, set package = character(0) (and lib.loc = NULL, the default).

See Also

help for obtaining documentation on data sets, save for creating the second (.rda) kind of data, typically the most efficient one.

The ‘Writing R Extensions’ for considerations in preparing the data directory of a package.

Examples

Run this code
# NOT RUN {
require(utils)
data()                         # list all available data sets
try(data(package = "rpart") )  # list the data sets in the rpart package
data(USArrests, "VADeaths")    # load the data sets 'USArrests' and 'VADeaths'
# }
# NOT RUN {
## Alternatively
ds <- c("USArrests", "VADeaths"); data(list = ds)
# }
# NOT RUN {
help(USArrests)                # give information on data set 'USArrests'
# }

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