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vitality (version 1.3)

dataPrep: Function for data preparation

Description

Function to deal with NAs, right truncated data, and datatype (i.e. cumulative survival or incremental mortality).

Usage

dataPrep(time, sdata, datatype, rc.data,
    returnMatrix = FALSE)

Arguments

time

A vector of observation dates

sdata

A vector of survival data of the same length as time

datatype

either "CUM" for cumulative or "INC" for incremental

rc.data

Boolean. Is data right-censored?

returnMatrix

Boolean. False returns a data frame, true returns a matrix. (as in the original), if "matrix" returns a matrix instead, with the "rc.data" column being 0 for FALSE, 1 for TRUE, or 2 for TF

Value

Returns a data.frame or matrix with columns time, sfract, x1, x2, Ni (incremental survival fraction), rc.data.

Details

This function is designed for use in the primary vitality model fitting functions in this package. See package documentation.