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xcms (version 1.48.0)

absent-methods: Determine which peaks are absent / present in a sample class

Description

Determine which peaks are absent / present in a sample class

Arguments

object
class
Name of a sample class from sampclass
minfrac
minimum fraction of samples necessary in the class to be absent/present

Value

An logical vector with the same length as nrow(groups(object)).

Methods

object = "xcmsSet"
absent(object, ...) present(object, ...)

Details

Determine which peaks are absent / present in a sample class The functions treat peaks that are only present because of fillPeaks correctly, i.e. does not count them as present.

See Also

group diffreport