Compress, uncompress and verify ZooImage Data files.
zidCompress(zidir, type = c("ZI1", "ZI2", "ZI3", "ZI4", "ZI5"), check = TRUE,
check.vignettes = TRUE, replace = FALSE, delete.source = replace)
zidCompressAll(path = ".", samples = NULL, type = c("ZI1", "ZI2", "ZI3", "ZI4", "ZI5"),
check = TRUE, check.vignettes = TRUE, replace = FALSE,
delete.source = replace)zidClean(path = ".", samples = NULL)
zidDatMake(zidir, type = "ZI5", replace = FALSE)
zidDatRead(zidfile)
zidUncompress(zidfile, path = dirname(zidfile), delete.source = FALSE)
zidUncompressAll(path = ".", zidfiles = zidList(path, full.names = TRUE),
path.extract = path, skip.existing.dirs = TRUE, delete.source = FALSE)
zidVerify(zidir, type = c("ZI1", "ZI2", "ZI3", "ZI4", "ZI5"), check.vignettes = TRUE)
zidVerifyAll(path = ".", samples = NULL, type = c("ZI1", "ZI2", "ZI3", "ZI4", "ZI5"),
check.vignettes = TRUE)
a directory containing data to put in a .zid files.
the ZI file format, currently 'ZI1', 'ZI2', 'ZI3', 'ZI4', or 'ZI5' types are supported (ZooImage1-5).
do we check the files in this directory before/after compression?
do we check if the future .zid file contains all vignettes?
do we replace existing files?
do we delete source files after compression?
(un)compress or verify all subdirectories (except those starting with '\_') in respective .zid files. Also, a place where to put uncompressed files (in the 'sample' subdirectory).
a list of 'samples', i.e., subdirectories to process.
a .zid file to uncompress or read from.
a series of .zid files to uncompress.
a place where to extract data from .zid files.
do not unzip if the subdir already exists.