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stats (version 3.3)

The R Stats Package

Description

R statistical functions.

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Version

Version

3.3

License

Part of R 3.3

Last Published

December 12th, 2019

Functions in stats (3.3)

ARMAtoMA

Convert ARMA Process to Infinite MA Process
Beta

The Beta Distribution
ARMAacf

Compute Theoretical ACF for an ARMA Process
Exponential

The Exponential Distribution
FDist

The F Distribution
GammaDist

The Gamma Distribution
Hypergeometric

The Hypergeometric Distribution
Geometric

The Geometric Distribution
KalmanLike

Kalman Filtering
IQR

The Interquartile Range
Chisquare

The (non-central) Chi-Squared Distribution
HoltWinters

Holt-Winters Filtering
AIC

Akaike's An Information Criterion
Multinom

The Multinomial Distribution
Distributions

Distributions in the stats package
Binomial

The Binomial Distribution
Logistic

The Logistic Distribution
NLSstClosestX

Inverse Interpolation
NLSstRtAsymptote

Horizontal Asymptote on the Right Side
Lognormal

The Log Normal Distribution
NLSstAsymptotic

Fit the Asymptotic Regression Model
SSD

SSD Matrix and Estimated Variance Matrix in Multivariate Models
NegBinomial

The Negative Binomial Distribution
NLSstLfAsymptote

Horizontal Asymptote on the Left Side
SSasymp

Self-Starting Nls Asymptotic Regression Model
Cauchy

The Cauchy Distribution
SSbiexp

Self-Starting Nls Biexponential model
SSfpl

Self-Starting Nls Four-Parameter Logistic Model
SSgompertz

Self-Starting Nls Gompertz Growth Model
SSlogis

Self-Starting Nls Logistic Model
SSweibull

Self-Starting Nls Weibull Growth Curve Model
SSasympOff

Self-Starting Nls Asymptotic Regression Model with an Offset
SSmicmen

Self-Starting Nls Michaelis-Menten Model
SSfol

Self-Starting Nls First-order Compartment Model
SSasympOrig

Self-Starting Nls Asymptotic Regression Model through the Origin
Poisson

The Poisson Distribution
Normal

The Normal Distribution
StructTS

Fit Structural Time Series
TukeyHSD

Compute Tukey Honest Significant Differences
TDist

The Student t Distribution
Weibull

The Weibull Distribution
SignRank

Distribution of the Wilcoxon Signed Rank Statistic
Uniform

The Uniform Distribution
addmargins

Puts Arbitrary Margins on Multidimensional Tables or Arrays
add1

Add or Drop All Possible Single Terms to a Model
anova

Anova Tables
anova.glm

Analysis of Deviance for Generalized Linear Model Fits
alias

Find Aliases (Dependencies) in a Model
anova.mlm

Comparisons between Multivariate Linear Models
aggregate

Compute Summary Statistics of Data Subsets
Tukey

The Studentized Range Distribution
anova.lm

ANOVA for Linear Model Fits
approxfun

Interpolation Functions
ar

Fit Autoregressive Models to Time Series
ar.ols

Fit Autoregressive Models to Time Series by OLS
aov

Fit an Analysis of Variance Model
arima

ARIMA Modelling of Time Series
arima.sim

Simulate from an ARIMA Model
ave

Group Averages Over Level Combinations of Factors
ansari.test

Ansari-Bradley Test
bandwidth

Bandwidth Selectors for Kernel Density Estimation
binom.test

Exact Binomial Test
as.hclust

Convert Objects to Class hclust
biplot.princomp

Biplot for Principal Components
asOneSidedFormula

Convert to One-Sided Formula
birthday

Probability of coincidences
case+variable.names

Case and Variable Names of Fitted Models
bartlett.test

Bartlett Test of Homogeneity of Variances
cancor

Canonical Correlations
arima0

ARIMA Modelling of Time Series -- Preliminary Version
Box.test

Box-Pierce and Ljung-Box Tests
.checkMFClasses

Functions to Check the Type of Variables passed to Model Frames
chisq.test

Pearson's Chi-squared Test for Count Data
coef

Extract Model Coefficients
constrOptim

Linearly Constrained Optimization
cmdscale

Classical (Metric) Multidimensional Scaling
confint

Confidence Intervals for Model Parameters
complete.cases

Find Complete Cases
contrasts

Get and Set Contrast Matrices
convolve

Convolution of Sequences via FFT
cov.wt

Weighted Covariance Matrices
cophenetic

Cophenetic Distances for a Hierarchical Clustering
cor

Correlation, Variance and Covariance (Matrices)
contrast

(Possibly Sparse) Contrast Matrices
cor.test

Test for Association/Correlation Between Paired Samples
cutree

Cut a Tree into Groups of Data
dendrapply

Apply a Function to All Nodes of a Dendrogram
delete.response

Modify Terms Objects
dendrogram

General Tree Structures
deriv

Symbolic and Algorithmic Derivatives of Simple Expressions
deviance

Model Deviance
df.residual

Residual Degrees-of-Freedom
density

Kernel Density Estimation
embed

Embedding a Time Series
eff.aovlist

Compute Efficiencies of Multistratum Analysis of Variance
diffinv

Discrete Integration: Inverse of Differencing
effects

Effects from Fitted Model
dist

Distance Matrix Computation
family

Family Objects for Models
factanal

Factor Analysis
factor.scope

Compute Allowed Changes in Adding to or Dropping from a Formula
cpgram

Plot Cumulative Periodogram
fitted

Extract Model Fitted Values
fivenum

Tukey Five-Number Summaries
fft

Fast Discrete Fourier Transform (FFT)
dummy.coef

Extract Coefficients in Original Coding
filter

Linear Filtering on a Time Series
fligner.test

Fligner-Killeen Test of Homogeneity of Variances
formula.nls

Extract Model Formula from nls Object
formula

Model Formulae
fisher.test

Fisher's Exact Test for Count Data
expand.model.frame

Add new variables to a model frame
friedman.test

Friedman Rank Sum Test
getInitial

Get Initial Parameter Estimates
glm.control

Auxiliary for Controlling GLM Fitting
ftable.formula

Formula Notation for Flat Contingency Tables
ftable

Flat Contingency Tables
hclust

Hierarchical Clustering
glm

Fitting Generalized Linear Models
heatmap

Draw a Heat Map
decompose

Classical Seasonal Decomposition by Moving Averages
is.empty.model

Test if a Model's Formula is Empty
integrate

Integration of One-Dimensional Functions
identify.hclust

Identify Clusters in a Dendrogram
interaction.plot

Two-way Interaction Plot
isoreg

Isotonic / Monotone Regression
glm.summaries

Accessing Generalized Linear Model Fits
kernapply

Apply Smoothing Kernel
influence.measures

Regression Deletion Diagnostics
extractAIC

Extract AIC from a Fitted Model
ecdf

Empirical Cumulative Distribution Function
ks.test

Kolmogorov-Smirnov Tests
kmeans

K-Means Clustering
kernel

Smoothing Kernel Objects
kruskal.test

Kruskal-Wallis Rank Sum Test
acf2AR

Compute an AR Process Exactly Fitting an ACF
acf

Auto- and Cross- Covariance and -Correlation Function Estimation
line

Robust Line Fitting
Wilcoxon

Distribution of the Wilcoxon Rank Sum Statistic
lag.plot

Time Series Lag Plots
ksmooth

Kernel Regression Smoother
listof

A Class for Lists of (Parts of) Model Fits
lag

Lag a Time Series
lm.influence

Regression Diagnostics
lowess

Scatter Plot Smoothing
loadings

Print Loadings in Factor Analysis
median

Median Value
mantelhaen.test

Cochran-Mantel-Haenszel Chi-Squared Test for Count Data
make.link

Create a Link for GLM Families
lm

Fitting Linear Models
lm.summaries

Accessing Linear Model Fits
model.extract

Extract Components from a Model Frame
lsfit

Find the Least Squares Fit
mood.test

Mood Two-Sample Test of Scale
logLik

Extract Log-Likelihood
mad

Median Absolute Deviation
manova

Multivariate Analysis of Variance
medpolish

Median Polish of a Matrix
mahalanobis

Mahalanobis Distance
na.fail

Handle Missing Values in Objects
loess.control

Set Parameters for Loess
monthplot

Plot a Seasonal or other Subseries from a Time Series
mauchly.test

Mauchly's Test of Sphericity
model.matrix

Construct Design Matrices
mcnemar.test

McNemar's Chi-squared Test for Count Data
na.action

NA Action
ls.diag

Compute Diagnostics for lsfit Regression Results
ls.print

Print lsfit Regression Results
naprint

Adjust for Missing Values
nextn

Highly Composite Numbers
makepredictcall

Utility Function for Safe Prediction
loglin

Fitting Log-Linear Models
model.frame

Extracting the Model Frame from a Formula or Fit
model.tables

Compute Tables of Results from an Aov Model Fit
naresid

Adjust for Missing Values
lm.fit

Fitter Functions for Linear Models
na.contiguous

Find Longest Contiguous Stretch of non-NAs
loess

Local Polynomial Regression Fitting
nls.control

Control the Iterations in nls
nobs

Extract the Number of Observations from a Fit.
numericDeriv

Evaluate Derivatives Numerically
optim

General-purpose Optimization
nlminb

Optimization using PORT routines
nlm

Non-Linear Minimization
plot.density

Plot Method for Kernel Density Estimation
oneway.test

Test for Equal Means in a One-Way Layout
pairwise.table

Tabulate p values for pairwise comparisons
plot.isoreg

Plot Method for isoreg Objects
pairwise.t.test

Pairwise t tests
plot.ts

Plotting Time-Series Objects
poly

Compute Orthogonal Polynomials
plot.profile.nls

Plot a profile.nls Object
plot.stepfun

Plot Step Functions
plot.HoltWinters

Plot function for HoltWinters objects
p.adjust

Adjust P-values for Multiple Comparisons
power.t.test

Power calculations for one and two sample t tests
power

Create a Power Link Object
plot.ppr

Plot Ridge Functions for Projection Pursuit Regression Fit
offset

Include an Offset in a Model Formula
princomp

Principal Components Analysis
predict

Model Predictions
print.ts

Printing and Formatting of Time-Series Objects
predict.glm

Predict Method for GLM Fits
plot.acf

Plot Autocovariance and Autocorrelation Functions
pairwise.wilcox.test

Pairwise Wilcoxon Rank Sum Tests
poisson.test

Exact Poisson tests
profile

Generic Function for Profiling Models
ppoints

Ordinates for Probability Plotting
proj

Projections of Models
read.ftable

Manipulate Flat Contingency Tables
preplot

Pre-computations for a Plotting Object
power.anova.test

Power Calculations for Balanced One-Way Analysis of Variance Tests
plot.spec

Plotting Spectral Densities
plot.lm

Plot Diagnostics for an lm Object
prcomp

Principal Components Analysis
quantile

Sample Quantiles
ppr

Projection Pursuit Regression
predict.loess

Predict Loess Curve or Surface
relevel

Reorder Levels of Factor
reshape

Reshape Grouped Data
screeplot

Screeplots
predict.lm

Predict method for Linear Model Fits
predict.Arima

Forecast from ARIMA fits
order.dendrogram

Ordering or Labels of the Leaves in a Dendrogram
prop.test

Test of Equal or Given Proportions
print.power.htest

Print Methods for Hypothesis Tests and Power Calculation Objects
reorder.dendrogram

Reorder a Dendrogram
rect.hclust

Draw Rectangles Around Hierarchical Clusters
PP.test

Phillips-Perron Test for Unit Roots
nls

Nonlinear Least Squares
setNames

Set the Names in an Object
rWishart

Random Wishart Distributed Matrices
prop.trend.test

Test for trend in proportions
replications

Number of Replications of Terms
residuals

Extract Model Residuals
profile.nls

Method for Profiling nls Objects
reorder.default

Reorder Levels of a Factor
se.contrast

Standard Errors for Contrasts in Model Terms
predict.HoltWinters

Prediction Function for Fitted Holt-Winters Models
sd

Standard Deviation
scatter.smooth

Scatter Plot with Smooth Curve Fitted by Loess
predict.nls

Predicting from Nonlinear Least Squares Fits
pairwise.prop.test

Pairwise comparisons for proportions
runmed

Running Medians -- Robust Scatter Plot Smoothing
selfStart

Construct Self-starting Nonlinear Models
printCoefmat

Print Coefficient Matrices
qqnorm

Quantile-Quantile Plots
optimize

One Dimensional Optimization
r2dtable

Random 2-way Tables with Given Marginals
spec.taper

Taper a Time Series by a Cosine Bell
start

Encode the Terminal Times of Time Series
splinefun

Interpolating Splines
smooth.spline

Fit a Smoothing Spline
stat.anova

GLM Anova Statistics
spec.pgram

Estimate Spectral Density of a Time Series by a Smoothed Periodogram
sortedXyData

Create a sortedXyData Object
smoothEnds

End Points Smoothing (for Running Medians)
summary.glm

Summarizing Generalized Linear Model Fits
sigma

Extract Residual Standard Deviation 'Sigma'
summary.nls

Summarizing Non-Linear Least-Squares Model Fits
ts-methods

Methods for Time Series Objects
smooth

Tukey's (Running Median) Smoothing
stats-deprecated

Deprecated Functions in Package stats
summary.manova

Summary Method for Multivariate Analysis of Variance
shapiro.test

Shapiro-Wilk Normality Test
simulate

Simulate Responses
terms.object

Description of Terms Objects
supsmu

Friedman's SuperSmoother
tsdiag

Diagnostic Plots for Time-Series Fits
stats-defunct

Defunct Functions in Package stats
spectrum

Spectral Density Estimation
stats-package

The R Stats Package
time

Sampling Times of Time Series
spec.ar

Estimate Spectral Density of a Time Series from AR Fit
ts.union

Bind Two or More Time Series
terms.formula

Construct a terms Object from a Formula
t.test

Student's t-Test
update.formula

Model Updating
summary.aov

Summarize an Analysis of Variance Model
ts.plot

Plot Multiple Time Series
symnum

Symbolic Number Coding
tsSmooth

Use Fixed-Interval Smoothing on Time Series
summary.princomp

Summary method for Principal Components Analysis
weighted.mean

Weighted Arithmetic Mean
update

Update and Re-fit a Model Call
tsp

Tsp Attribute of Time-Series-like Objects
ts

Time-Series Objects
varimax

Rotation Methods for Factor Analysis
termplot

Plot Regression Terms
var.test

F Test to Compare Two Variances
uniroot

One Dimensional Root (Zero) Finding
stepfun

Step Functions - Creation and Class
window

Time Windows
weights

Extract Model Weights
stlmethods

Methods for STL Objects
stl

Seasonal Decomposition of Time Series by Loess
xtabs

Cross Tabulation
step

Choose a model by AIC in a Stepwise Algorithm
toeplitz

Form Symmetric Toeplitz Matrix
summary.lm

Summarizing Linear Model Fits
terms

Model Terms
weighted.residuals

Compute Weighted Residuals
wilcox.test

Wilcoxon Rank Sum and Signed Rank Tests
power.prop.test

Power Calculations for Two-Sample Test for Proportions
quade.test

Quade Test
predict.smooth.spline

Predict from Smoothing Spline Fit
C

Sets Contrasts for a Factor
vcov

Calculate Variance-Covariance Matrix for a Fitted Model Object
biplot

Biplot of Multivariate Data