fix.bi_model

Replaces all variables with fixed values as given ; note that this will not
 replace differential equations and lead to an error if applied to states
 that are changed inside an "ode" block
For the help page of the base R <code>fix</code> function, see
 <code><a href="/link/fix?package=rbi&version=1.0.0" data-mini-rdoc="rbi::fix">fix</a></code>.

Provides a complete interface to 'LibBi', a library for Bayesian
inference (see <https://libbi.org> and Murray, 2015
<doi:10.18637/jss.v067.i10> for more information). This includes functions
for manipulating 'LibBi' models, for reading and writing 'LibBi'
input/output files, for converting 'LibBi' output to provide traces for use
with the coda package, and for running 'LibBi' to conduct inference.

Sebastian Funk

Interface to 'LibBi'

Pierre E. Jacob

Anthony Lee

Lawrence M. Murray

Sam Abbott

fix function

<dl><dt>x</dt>
<dd>a <code>bi_model</code> object</dd>
<dt>...</dt>
<dd>values to be assigned to the (named) variables</dd></dl>

Arguments

Replaces all variables with fixed values as given ; note that this will not
 replace differential equations and lead to an error if applied to states
 that are changed inside an "ode" block
For the help page of the base R <code>fix</code> function, see
 <code><a href='https://rdrr.io/r/utils/fix.html'>fix</a></code>.

Fix noise term, state or parameter of a libbi model — fix

<dl>

<dt>x</dt>
<dd>a <code>bi_model</code> object</dd>


<dt>...</dt>
<dd>values to be assigned to the (named) variables</dd>

</dl>

fix: Fix noise term, state or parameter of a libbi model

Description

Usage

Value

Arguments

See Also

Examples