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jetset

An R package with one-to-one gene-probeset mappings for Affymetrix human microarrays

jetset is available on CRAN

jetset is fully described in this publication:

Jetset: selecting an optimal microarray probe set to represent a gene
Qiyuan Li, Nicolai J. Birkbak, Balazs Gyorffy, Zoltan Szallasi, and Aron C. Eklund
BMC Bioinformatics 2011 Dec 15; 12:474
http://www.biomedcentral.com/1471-2105/12/474/abstract

Other version are available here: http://www.cbs.dtu.dk/biotools/jetset/

Installation

You can install the latest release on CRAN like this (recommended):

install.packages("jetset")

You can install the latest development version from GitHub like this:

library(devtools)
install_github("aroneklund/jetset")

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Version

Install

install.packages('jetset')

Monthly Downloads

602

Version

3.3.0

License

Artistic-2.0

Maintainer

Last Published

June 29th, 2016

Functions in jetset (3.3.0)

jscores

Retrieve jetset scores for probe sets
jmap

Retrieve jetset mapped probe sets
scores

Data: Probe set quality scores