Usage
read.ctd.woce.other(file, columns = NULL, station = NULL, missingValue, monitor = FALSE, debug = getOption("oceDebug"), processingLog, ...)
Arguments
file
A connection or a character string giving the name of the file to
load. For read.ctd.sbe()
and read.ctd.woce()
, this may be a
wildcard (e.g. "*.cnv"
or "*.csv"
) in which case the return
value is a vector containing CTD objects created by reading the files from
list.files
with pattern
set to the specified wildcard
pattern. columns
An optional list
that can be used to convert unrecognized
data names to resultant variable names. This is used only by
read.ctd.sbe
and read.ctd.odf
; see
Examples. station
Optional character string containing an identifying name or
number for the station. This can be useful if the routine cannot determine the
name automatically, or if another name is preferred.
missingValue
Optional missing-value flag; data matching this value will
be set to NA
upon reading. If this is provided, then it overrules any
missing-value flag found in the data. For Seabird (.cnv
) files, there is
usually no need to set missingValue
, because it can be inferred from the
header (typically as -9.990e-29). Set missingValue=NULL
to turn off
missing-value detection, even in .cnv
files that contain missing-value
codes in their headers.
monitor
Boolean, set to TRUE
to provide an indication of
progress. This is useful if filename
is a wildcard.
debug
An integer specifying whether debugging information is
to be printed during the processing. This is a general parameter that
is used by many oce
functions. Generally, setting debug=0
turns off the printing, while higher values suggest that more information
be printed.
processingLog
If provided, the action item to be stored in the log.
This is typically only provided for internal calls; the default that it provides is
better for normal calls by a user.
...
additional arguments, passed to called routines.