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CGHnormaliter (version 1.26.0)

Leukemia: Array CGH experiment data on childhood acute lymphoblastic leukemia (ALL) in humans

Description

A dataframe containing 30180 rows and 10 columns, representing the array CGH data of 3 ALL samples.

Usage

Leukemia

Arguments

Format

A dataframe containing the following 10 columns:
CloneID
The unique identifiers of array elements.
Chromosome
Chromosome number of each array element.
Start
Chromosomal start position in bp of each array element.
End
Chromosomal end position in bp of each array element.
Case1.test
Background corrected test intensity values for sample 1.
Case1.ref
Background corrected reference intensity values for sample 1.
Case2.test
Background corrected test intensity values for sample 2.
Case2.ref
Background corrected reference intensity values for sample 2.
Case3.test
Background corrected test intensity values for sample 3.
Case3.ref
Background corrected reference intensity values for sample 3.

Source

Provided by the authors (see references).

References

Paulsson K, Heidenblad M, Morse H, Borg A, Fioretos T, Johansson B: Identication of cryptic aberrations and characterization of translocation breakpoints using array CGH in high hyperdiploid childhood acute lymphoblastic leukemia. Leukemia 2006, 20:2002-2007.