reformatSiggenes

Reformats the Siggenes table output from the SAMR package

An open, multi-algorithmic pipeline for easy, fast and efficient
analysis of cellular sub-populations and the molecular signatures that
characterize them. The pipeline consists of four successive steps: data
pre-processing, cellular clustering with pseudo-temporal ordering, defining
differential expressed genes and biomarker identification. More details on
Ghannoum et. al. (2021) <doi:10.3390/ijms22031399>. This package implements
extensions of the work published by Ghannoum et. al. (2019)
<doi:10.1101/700989>.

Waldir Leoncio

DIscBIO

A User-Friendly Pipeline for Biomarker Discovery in Single-Cell
Transcriptomics

Salim Ghannoum

Alvaro Köhn-Luque

Damiano Fantini

reformatSiggenes function

<dl><dt>table</dt>
<dd>output from `samr::samr.compute.siggenes.table`</dd></dl>

Arguments

Author

Reformat Siggenes Table — reformatSiggenes

<dl>

<dt>table</dt>
<dd>output from `samr::samr.compute.siggenes.table`</dd>

</dl>

reformatSiggenes: Reformat Siggenes Table

Description

Usage

Arguments

Author

See Also