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EGAnet (version 2.0.7)

Exploratory Graph Analysis – a Framework for Estimating the Number of Dimensions in Multivariate Data using Network Psychometrics

Description

Implements the Exploratory Graph Analysis (EGA) framework for dimensionality and psychometric assessment. EGA estimates the number of dimensions in psychological data using network estimation methods and community detection algorithms. A bootstrap method is provided to assess the stability of dimensions and items. Fit is evaluated using the Entropy Fit family of indices. Unique Variable Analysis evaluates the extent to which items are locally dependent (or redundant). Network loadings provide similar information to factor loadings and can be used to compute network scores. A bootstrap and permutation approach are available to assess configural and metric invariance. Hierarchical structures can be detected using Hierarchical EGA. Time series and intensive longitudinal data can be analyzed using Dynamic EGA, supporting individual, group, and population level assessments.

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Version

Install

install.packages('EGAnet')

Monthly Downloads

2,978

Version

2.0.7

License

GPL (>= 3.0)

Maintainer

Last Published

September 2nd, 2024

Functions in EGAnet (2.0.7)

EGA

Exploratory Graph Analysis
EGA.estimate

Estimates EGA for Multidimensional Structures
Embed

Time-delay Embedding
TMFG

Triangulated Maximally Filtered Graph
LCT

Loadings Comparison Test
EGAnet-package

EGAnet-package
CFA

CFA Fit of EGA or hierEGA Structure
EBICglasso.qgraph

EBICglasso from qgraph 1.4.4
color_palette_EGA

EGA Color Palettes
bootEGA

Bootstrap Exploratory Graph Analysis
community.detection

Apply a Community Detection Algorithm
community.compare

Compares Community Detection Solutions Using Permutation
community.homogenize

Homogenize Community Memberships
community.consensus

Applies the Consensus Clustering Method (Louvain only)
boot.wmt

bootEGA Results of wmt2Data
UVA

Unique Variable Analysis
boot.ergoInfo

Bootstrap Test for the Ergodicity Information Index
auto.correlate

Automatic correlations
compare.EGA.plots

Visually Compare Two or More EGAnet plots
ega.wmt

EGA Network of wmt2Data
convert2tidygraph

Convert networks to tidygraph
dynEGA.ind.pop

Intra- and Inter-individual dynEGA
convert2igraph

Convert networks to igraph
community.unidimensional

Approaches to Detect Unidimensional Communities
dnn.weights

Loadings Comparison Test Deep Learning Neural Network Weights
dynEGA

Dynamic Exploratory Graph Analysis
dimensionStability

Dimension Stability Statistics from bootEGA
depression

Depression Data
entropyFit

Entropy Fit Index
genTEFI

Generalized Total Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
frobenius

Frobenius Norm (Similarity)
ergoInfo

Ergodicity Information Index
information

Information Theory Metrics
glla

Generalized Local Linear Approximation
igraph2matrix

Convert network to matrix
infoCluster

Information Theoretic Mixture Clustering for dynEGA
intelligenceBattery

Intelligence Data
hierEGA

Hierarchical EGA
optimism

Optimism Data
network.predictability

Predict New Data based on Network
jsd

Jensen-Shannon Distance
network.estimation

Apply a Network Estimation Method
modularity

Computes the (Signed) Modularity Statistic
network.compare

Compares Network Structures Using Permutation
net.loads

Network Loadings
net.scores

Network Scores
invariance

Measurement Invariance of EGA Structure
itemStability

Item Stability Statistics from bootEGA
simDFM

Simulate data following a Dynamic Factor Model
polychoric.matrix

Computes Polychoric Correlations
riEGA

Random-Intercept EGA
sim.dynEGA

sim.dynEGA Data
tefi

Total Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
totalCor

Total Correlation
totalCorMat

Total Correlation Matrix
vn.entropy

Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
wto

Weighted Topological Overlap
prime.num

Prime Numbers through 100,000
wmt2

WMT-2 Data
EGA.fit

EGA Optimal Model Fit using the Total Entropy Fit Index (tefi)
EGAnet-plot

S3 Plot Methods for EGAnet