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EMbC (version 2.0.4)

Expectation-Maximization Binary Clustering

Description

Unsupervised, multivariate, binary clustering for meaningful annotation of data, taking into account the uncertainty in the data. A specific constructor for trajectory analysis in movement ecology yields behavioural annotation of trajectories based on estimated local measures of velocity and turning angle, eventually with solar position covariate as a daytime indicator, ("Expectation-Maximization Binary Clustering for Behavioural Annotation").

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Version

Install

install.packages('EMbC')

Monthly Downloads

269

Version

2.0.4

License

GPL-3 | file LICENSE

Maintainer

Joan Garriga

Last Published

October 3rd, 2023

Functions in EMbC (2.0.4)

stts

Clustering statistics.
pkml

Generate a pointwise .kml file of a binClstPath_instance
lblp

labeling profile plot
lkhp

Likelihood profile plots
x2d

Synthetic 2D object used in the examples
pmap

Generate an HTML pointwise webmap of a binClstPath_instance.
varp

Variables' profile plots
view

Path fast view
binClstPath-class

Binary Clustering Path Class
binClstPath_instance

binClstPath Instance definition
bmap

Generate an HTML burstwise webmap of a binClstPath_instance.
binClst_instance

binClst Instance definition
binClst-class

Binary Clustering Class
binClstStck-class

Binary Clustering Stack Class
bkml

Generate a burstwise .kml file of a binClstPath_instance.
chkp

Check labeling profile
cnfm

Confusion matrix
EMbC-package

Expectation-Maximization binary Clustering package.
sct3

Dynamic 3D-scatterplot
rlbl

Manual relabeling of clusters.
setc

Sets binClst color palette .
sctr

Clustering 2D-scatterplot
embc

General pourpose multivariate binary Clustering (EMbC)
stbc

speed/turn bivariate binary Clustering.
expth

Synthetic path used in the examples
slct

Select a single path from a binClstStck instance.
smth

Posterior smoothing of single local labels.