NormiR.methods:
ExiMiR functions for enumerating the names of low-level normalization methods or arguments
Description
These functions enumerate the names of methods or arguments of the low-level functions for
miRNA raw data normalization (i.e. background correction, (spike-in probe-based) normalization,
PM corrrection, summarization). They take into account how the input AffyBatch object
was created as well as the underlying array type.
Usage
NormiR.bgcorrect.methods(object)
NormiR.normalize.methods(object)
NormiR.pmcorrect.methods(object)
NormiR.summary.methods()
NormiR.spikein.args()
Arguments
object
An AffyBatch object.
Value
List of strings containing the names of the methods or arguments available for the input AffyBatch object.
Details
See accompanying vignette.
See Also
NormiR,
bg.correct.miR,
norm.miR,
summarize.miR.