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ExiMiR (version 2.14.0)

R functions for the normalization of Exiqon miRNA array data

Description

This package contains functions for reading raw data in ImaGene TXT format obtained from Exiqon miRCURY LNA arrays, annotating them with appropriate GAL files, and normalizing them using a spike-in probe-based method. Other platforms and data formats are also supported.

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Version

Version

2.14.0

License

GPL-2

Maintainer

Last Published

February 15th, 2017

Functions in ExiMiR (2.14.0)

ExiMiR low-level function for miRNA raw data normalization.

GAL Environment Maker

R functions for the normalization of Exiqon miRNA array data

ExiMiR function for creating an AffyBatch object from other object types (RGList, EListRaw, MAList or list)

R annotation environment for GEO series GSE20122

ExiMiR functions for enumerating the names of low-level normalization methods or arguments

ExiMiR low-level function for summarization.

Affybatch object for the raw data from GEO series GSE19183

ExiMiR high-level function for miRNA raw data normalization.

ExiMiR low-level function for background correction

Affybatch object for the raw data from GEO series GSE20122

ExiMiR function for reading Exiqon raw data into an AffyBatch object.