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FSAdata (version 0.4.1)

Data to Support Fish Stock Assessment ('FSA') Package

Description

The datasets to support the Fish Stock Assessment ('FSA') package.

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Install

install.packages('FSAdata')

Monthly Downloads

1,230

Version

0.4.1

License

GPL (>= 2)

Maintainer

Last Published

August 24th, 2023

Functions in FSAdata (0.4.1)

BlueCatfish

Ages and lengths of Blue Catfish.
BassFL

Catch-at-age for Suwanee and Largemouth Bass.
AHerringChile

Ages and lengths of Araucanian Herring from Chilean waters.
CreelMN

Results of a large number of creel surveys in Minnestoa lakes.
BrookTroutNEWP

Catches in removal events for Brook Trout in the Nashwaak Experimental Watersheds Project.
BloaterLH

Stock and recruitment data for Lake Huron Bloaters, 1981-1996.
BGHRsample

Information for each electrofishing sample from Big Hill Reservoir, KS, 2014.
BlackDrum2001

Biological data for Black Drum from Virginia waters of the Atlantic Ocean, 2001.
BrookTroutNEWP1

Catches in removal events for Brook Trout in the Nashwaak Experimental Watersheds Project.
AnchovetaChile

Ages and lengths of Anchoveta from Chilean waters.
BullTroutRML1

Lengths and weights for Bull Trout from two Rocky Mountain lakes and two eras.
Croaker1

Ages of Atlantic Croaker assigned from otoliths by two readers.
BlueCrab

Catch and effort data for male Blue Crabs.
BluefishAge

Ages of Bluefish assigned from otoliths by two readers.
FHCatfishATL

Catch-at-age of Flathead Catfish from three Atlantic rivers.
FHCatfish

Catch-at-age of Flathead Catfish from three southeastern rivers.
Cabezon

Ages, lengths, and maturity for female Cabezon from Oregon.
Casselman1990

Instantaneous growth rates for two calcified ageing structures.
CrappieARMS

Stock and recruitment data for Crappies from four reservoirs in Arkansas and Mississippi, USA.
BluegillIL

Length-at-marking and recapture and time-at-large of Bluegill.
BrookTroutOnt

Summarized single mark-recapture data for Brook Trout across many years.
BrownTroutVC1

Single census mark-recapture data with lengths for Brown Trout from Valley Creek, MN.
Deckeretal1999

Catches in removal events of Cutthroat Trout and Coho Salmon in Little Stawamus Creek (British Columbia, Canada) in 1997.
EuroPerchTJ

Ages, lengths, and sexes of European Perch.
FWDrumLE2

Ages (subsample) and lengths (all fish) for Freshwater Drum from Lake Erie.
JobfishSIO

Catch and effort data for South Indian Ocean Jobfish.
FWDrumLE1

Ages and lengths of Lake Erie Freshwater Drum.
Bonito

Ages and lengths of Australian Bonito.
JonesStockwell

Catches in removal events of Brown and Rainbow Trout at various locations.
BrookTroutNC

Stock and recruitment data for Brook Trout from Ball Creek, NC, 1991-2004.
Hake

Stock and recruitment data for Hake, 1982-1996.
CCatfishNB

Catch-at-age of Channel Catfish from two sections of the Platte River, NB.
DarterMahon

Catch and effort data for Fantail Darter.
DarterOnt

Ages and lengths of Channel Darters from two locations.
BullTroutTC

Catch-at-age for Bull Trout in Trestle Creek, ID.
BullTroutRML2

Ages and lengths of Bull Trout from two Rocky Mountain lakes at two times.
InchLake2

Lengths and weights for fish captured in Inch Lake
HalibutPAC

Stock and recruitment data for Pacific Halibut, 1929-1991.
InchLake1

Lengths for all fish captured in Inch Lake, WI, in two years
BluegillLM

Lengths and weights for Bluegill from Lake Mary, MN.
BluntnoseIL1

Subampled lengths of Bluntnose Minnows from Inch Lake, WI.
LakeTroutMI

Stock and recruitment data for Lake Trout in Lake Superior, 1971-1991.
Jonubi2

Ages (subsample) and lengths (all fish) of Jonubi.
LakeTroutGIS

Stock and recruitment data for Lake Trout from Gull Island Shoal, Lake Superior, 1964-1991.
Jonubi1

Ages and lengths of male Jonubi.
Mosquitofish

Ages and lengths of Eastern Mosquitofish from ten locations from southern France to southern Spain.
LMBassBL

Lengths for Largemouth Bass from Boomer Lake, OK.
LMBassLCB

Lengths for Largemouth Bass from Lake Carl Blackwell, OK.
Morwong4a

Ages (subsample) and lengths (all fish) for Morwong from Morwong4.
CreekChub

Ages (subsample) and lengths (all fish) for Creek Chub.
Croaker2

Ages, lengths, and sexes of Atlantic Croaker by sex.
Menhaden1

Catch-at-age for Gulf Menhaden, 1964-2004.
CutthroatALf

Capture histories (9 samples) of Cutthroat Trout from Auke Lake.
Ghats

Species accumulation data for fish of the Western Ghats of India.
ChinookKR

Stock and recruitment data for Klamath River Chinook Salmon, 1979-2000.
LobsterPEI

Catch and effort data for Prince Edward Island Lobster.
PygmyWFBC

Biological data for Pygmy Whitefish from Dina Lake #1 (British Columbia), 2000 and 2001.
Herman

Lengths for Walleye, Yellow Perch, Black Crappie, and Black Bullheads from Lake Herman, SD.
PSalmonAK

Stock and recruitment data for Alaskan Pink Salmon, 1960-1990.
RBSmeltLM

Lengths for Rainbow Smelt from Lake Michigan, 1977.
MuskieWI06MR

Summarized mark-recapture data for Muskellunge from many Wisconsin Lakes, 2006.
RBTroutKenai

Length-at-marking and recapture and time-at-large of Rainbow Trout.
HerringBWE

Stock and recruitment data for Blackwater Estuary Herring, 1962-1997.
CiscoTL

Lengths, weights, and sex of Cisco from Trout Lake, WI.
.onAttach

Internal functions used in FSAdata.
SalmonidsMCCA

Catches in removal events of Cutthroate Trout and Steelhead of various sizes in two reaches of McGarvey Creek (CA).
FSAdata

Data to support the FSA package.
SardineChile

Ages and lengths of two year-classes of Sardine from Chilean waters.
GreensCreekMine

Catches in removal events of Coho Salmon and Dolly Varden Char at various locations near the Greens Creek (AK) Mine site.
HerringISS

Stock and recruitment data for Icelandic summer spawning Herring, 1946-1996.
Lizardfish

Stock and recruitment data for Greater Lizardfish, 1955-1964.
KingCrabAK

Stock and recruitment data for Red King Crab in Alaska, 1960-2004.
RBSmeltErie

Recruitment time-series for Rainbow Smelt in Lake Erie, 1977-1996.
LakeTroutALTER

Biological data for Lake Trout from the Arctic LTER (AK).
HumpbackWFCR

Capture histories (2 sample) of Humpback Whitefish.
LJCisco

Ages and lengths of Longjaw Cisco from two locations in Lake Michigan.
LobsterHI

Catch and effort data for Hawaiian Islands Slipper Lobster.
Morwong4

Ages and lengths of Morwong.
Morwong3

Ages of Morwong assigned from otoliths by two readers.
SalmonADP

Catches in removal events of salmon parr.
MulletBS

Ages of Red Mullet assigned from whole and broken-burnt otoliths.
SLampreyGL

Stock and recruitment data for Sea Lamprey in the Great Lakes, 1997-2007.
MuskieSLR

Ages of Muskellunge assigned from scales and cleithra.
RockBassCL

Catch-at-age of Cayuga Lake Rock Bass.
Morwong1

Ages of Morwong assigned from otoliths by Reader A at two times.
LakeTroutEggs

Length and egg deposition of Lake Superior Lake Trout.
Morwong2

Ages of Morwong assigned from otoliths by Reader B at two times.
SpotVA2

Ages (subsample) and lengths (all fish) for Spot.
SculpinALTER

Biological data for Slimy Sculpin from the Arctic LTER (AK).
Pallid

Lengths and weights for Pallid Sturgeon from four locations in the Missouri River.
PikeHL

Capture histories (2 samples) of Northern Pike from Harding Lake.
Riffleshell

Summarized multiple mark-recapture data for Tan Riffleshell.
SpottedSucker1

Ages and lengths of Spotted Sucker.
ShadCR

Ages of American Shad assigned from scales by three readers at two times.
Pathfinder

Catch and effort for three Snapper species in a depletion experiment.
PikeIL

Catch and effort data for Northern Pike from Island Lake, NB.
RWhitefishIR

Ages and lengths of Round Whitefish.
RedDrum

Ages and lengths for Red Drum from the Atlantic Coast.
ShrimpGuam

Catch and effort data for Deepwater Caridean Shrimp.
SimonsonLyons

Catches in removal events of trout at various locations.
SunfishLP

Catch-at-age for Bluegill and Redear Sunfish in Florida.
SunfishIN

Summarized multiple mark-recapture data for Redear Sunfish.
SnapperHG2

Ages (subsample) and lengths (all fish) for Snapper.
VendaceLP

Stock and recruitment data for Vendace from Lake Puulavesi, 1982-1996.
RockBassLO2

Ages (subsample) and lengths (all fish) for Rock Bass from Lake Ontario.
RockBassLO1

Ages and lengths of Lake Ontario Rock Bass.
SnapperHG1

Age (subsample) and length (all fish) of Snapper from two survey locations.
RuffeTL89

Lengths of Ruffe captured from the St. Louis River in July, 1989.
SturgeonBL

Summarized multiple mark-recapture data for Lake Sturgeon.
SockeyeSR

Stock and recruitment data for Skeena River Sockeye Salmon, 1940-1967.
SturgeonGB

Capture years and ages for Lake Sturgeon from Goulais Bay, Lake Superior, Ont.
VendaceLP2

Stock and recruitment data for Vendace from Lake Pyhajarvi.
SardinesPacific

Stock and recruitment data for Pacific Sardines, 1935-1990.
SardineLK

Ages and lengths of larval Lake Tanganyika Sardine.
RuffeSLRH92

Biological data for Ruffe captured from the St. Louis River in 1992.
TPrawnsEG

Stock and recruitment data for Exmouth Gulf Tiger Prawn, 1970-83.
WalleyeErie2

Biological data for Walleye from Lake Erie, 2003-2014.
SockeyeKL

Stock and recruitment data for Sockeye Salmon from Karluk Lake, AK, 1921-1948.
TroutperchLM1

Ages, lengths, and sexes of Troutperch.
TroutBR

Ages and lengths of migratory Brown and Rainbow Trout.
StripedBass5

Ages of Striped Bass assigned from otoliths by two readers.
StripedBass6

Ages of Striped Bass assigned from scales and otoliths.
WalleyeKS

Catch-at-age for Walleye from eight Kansas reservoirs.
WalleyeEL

Stock and recruitment data for Walleye from Escanaba Lake, WI, 1958-1992.
TroutADP

Catches in removal events of trout.
PikeNYPartial2

Capture histories (4 samples) of a subset of Northern Pike from Buckthorn Marsh.
StripedBass4

Ages of Striped Bass assigned from scales by two readers.
YPerchGL

Lengths and weights of Yellow Perch from Grafton Lake (ME) by year.
WhitefishGSL

Catch-at-age of Great Slave Lake Whitefish (commercial) by area.
WhitefishLS

Landings and value of Lake Superior Lake Whitefish.
YPerchRL

Recruitment time-series for Yellow Perch in Red Lakes, MN, 1942-1960.
StripedBass3

Ages (subsample) and lengths (all fish) for Striped Bass.
WalleyeErie

Recruitment time-series for Walleye in Lake Erie, 1959-1972.
WalleyeWad

Catches-at-age for male and female Walleye from Lake Winnebago, WI, 2010.
WhitefishMB

Ages of Lake Whitefish from four lakes assigned from scales and fin-rays.
WalleyeML

Back-calculated lengths-at-age for Walleye from Lake Mille Lacs, 2000-2011.
WShrimpGA

Stock and recruitment data for White Shrimp off the coast of Georgia (USA), 1979-2000.
WalleyeConsumption

Consumption of prey by Walleye.
WalleyeWyrlng

Annual catches of yearling Walleye in bottom trawls from Lake Winnebago, WI, 1986-2010.
WhitefishTB

Stock and recruitment data for Lake Whitefish in Thunder Bay, Lake Superior, 1975-1988.
WalleyePS

Ages of Walleye assigned from otoliths, scales, and spines.
YERockfish

Ages, lengths, and maturity for Yelloweye Rockfish.
RBTroutUNSP

Capture histories (2 sample) of Rainbow Trout.
RWhitefishAI

Ages and lengths of Round Whitefish.
WalleyeMN06a

Catch-at-age for Walleye.
PikeWindermere

Stock and recruitment data for Northern Pike from Lake Windermere, 1944-1981.
YPerchSB1

Lengths for Yellow Perch from two locations in Saginaw Bay, Lake Michigan.
YPerchTL

Lengths and weights for Yellow Perch from Trout Lake, WI.
YPerchSB

Stock and recruitment data for Yellow Perch from South Bay, Lake Huron, 1950-1983.
YPerchCB1

Catch-at-age for Yellow Perch from Chequamegon Bay, Lake Superior.
Snapper

Lengths for Snapper from Australia.
WhiteGrunt1

Catch-at-age for White Grunt.
SiscowetMI2004

Ages (subsample) and lengths (all fish) for male and female Siscowet Lake Trout captured at four locations in Michigan waters of Lake Superior.
WalleyeRL

Growth increment data for Red Lakes Walleye.
StripedBass1

Ages of Striped Bass assigned from scales and otoliths.
StripedBass2

Ages and lengths of Atlantic Ocean Striped Bass.
TroutperchLM2

Lengths for Troutperch from Lake Michigan, 1977.
TroutperchLM3

Subsampled lengths of Troutperch from Lake Michigan, 1977.
WalleyePL

Summarized multiple mark-recapture data for YOY walleye.
WhiteGrunt2

Ages, lengths, and sexes of White Grunt.
YPerchGB

Recruitment time-series for Yellow Perch in Green Bay, 1978-1992.
YPerchCB2

Stock and recruitment data for Yellow Perch in Chequamegon Bay, 1975-1986.
WalleyeMN06b

Summarized multiple mark-recapture data for Walleye from four lakes in Northern Minnesota.
YTFlounder

Ages of Yellowtail Flounder assigned from scales and otoliths.
AfricanRivers

Characteristics of a sample of West African rivers.
AlewifeLH

Ages of Lake Huron Alewife assigned from otoliths and scales.
BSkateGB

Stock and recruitment data for Barndoor Skate from Georges Bank, 1966-2007.
BGHRfish

Fish information from samples collected from Big Hill Reservoir, KS, 2014.