post_filt_nb_sites

This function allows the a posteriori filtering on the number of sites/individuals.

Allows to detect spatial clusters of abnormal values on multivariate or functional data. Martin KULLDORFF and Lan HUANG and Kevin KONTY (2009) <doi:10.1186/1476-072X-8-58>, Inkyung JUNG and Ho Jin CHO (2015) <doi:10.1186/s12942-015-0024-6>, Lionel CUCALA and Michael GENIN and Caroline LANIER and Florent OCCELLI (2017) <doi:10.1016/j.spasta.2017.06.001>, Lionel CUCALA and Michael GENIN and Florent OCCELLI and Julien SOULA (2019) <doi:10.1016/j.spasta.2018.10.002>, Camille FREVENT and Mohamed-Salem AHMED and Matthieu MARBAC and Michael GENIN (2021) <doi:10.1016/j.spasta.2021.100550>, Zaineb SMIDA and Lionel CUCALA and Ali GANNOUN and Ghislain Durif (2022) <doi:10.1016/j.csda.2021.107378>, Camille FREVENT and Mohamed-Salem AHMED and Sophie DABO-NIANG and Michael GENIN (2023) <doi:10.1093/jrsssc/qlad017>.

Camille FREVENT

HDSpatialScan

Multivariate and Functional Spatial Scan Statistics

Mohamed-Salem AHMED

Julien SOULA

Zaineb SMIDA

Lionel CUCALA

Sophie DABO-NIANG

Michaël GENIN

post_filt_nb_sites function

<dl><dt>mini_post</dt>
<dd>numeric. A minimum to filter the significant clusters a posteriori. The default NULL is for no filtering with a a posteriori minimum.</dd>
<dt>maxi_post</dt>
<dd>numeric. A maximum to filter the significant clusters a posteriori. The default NULL is for no filtering with a a posteriori maximum.</dd>
<dt>nb_sites</dt>
<dd>numeric. The number of sites/individuals.</dd>
<dt>index_clusters_temp</dt>
<dd>numeric vector. The indices of the detected clusters.</dd>
<dt>matrix_clusters</dt>
<dd>numeric matrix. Matrix in which each column represents a potential cluster. A value of 1 indicate that the site (or the individual) is in the cluster, 0 otherwise.</dd></dl>

Arguments

A posteriori filtering on the number of sites/individuals — post_filt_nb_sites

<dl>

<dt>mini_post</dt>
<dd>numeric. A minimum to filter the significant clusters a posteriori. The default NULL is for no filtering with a a posteriori minimum.</dd>


<dt>maxi_post</dt>
<dd>numeric. A maximum to filter the significant clusters a posteriori. The default NULL is for no filtering with a a posteriori maximum.</dd>


<dt>nb_sites</dt>
<dd>numeric. The number of sites/individuals.</dd>


<dt>index_clusters_temp</dt>
<dd>numeric vector. The indices of the detected clusters.</dd>


<dt>matrix_clusters</dt>
<dd>numeric matrix. Matrix in which each column represents a potential cluster. A value of 1 indicate that the site (or the individual) is in the cluster, 0 otherwise.</dd>

</dl>

post_filt_nb_sites: A posteriori filtering on the number of sites/individuals

Description

Usage

Value

Arguments