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LBE (version 1.40.0)

Estimation of the false discovery rate.

Description

LBE is an efficient procedure for estimating the proportion of true null hypotheses, the false discovery rate (and so the q-values) in the framework of estimating procedures based on the marginal distribution of the p-values without assumption for the alternative hypothesis.

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Version

Version

1.40.0

License

GPL-2

Maintainer

Cyril Dalmasso

Last Published

February 15th, 2017

Functions in LBE (1.40.0)

hedenfalk.pval

p-values corresponding to the gene expression data from Hedenfalk et al. (2001).
LBE-package

Estimation of the proportion of true null hypotheses, the false discovery rate and the q-values.
LBEa

Optimal setting for the parameter a
LBEplot

Graphical display of LBE objects.
LBEsummary

Display LBE object
golub.pval

p-values corresponding to the gene expression data from Golub et al. (1999).
LBE

Estimation of the false discovery rate.
LBEwrite

Write the results of an LBE object to a file.