LBE (version 1.40.0)

LBEplot: Graphical display of LBE objects.

Description

Graphical display of LBE objects.

Usage

LBEplot(LBEobj, rng = c(0, 0.1), plot.type = c("multiple", "main"), legend = TRUE)

Arguments

LBEobj

LBE object.

rng

Range of q-values to consider.

plot.type

If plot.type == "main", The estimated q-values versus the p-values are plotted together with the histogram of the p-values. If plot.type == "multiple" (default value), several graphics are displayed.

legend

Logical value for displaying the legend on the plot (when plot.type == "main").

Details

If plot.type == "multiple", the following graphics are displayed: 1. The histogram of the p-values. 2. The estimated q-values versus the p-values. 3. The number of significant tests versus each qvalue cutoff. 4. The number of expected false positives versus the number of significant tests.

See Also

LBE, LBEsummary, LBEwrite, LBEa

Examples

## start
data(hedenfalk.pval)
res=LBE(hedenfalk.pval,plot.type="none")
LBEplot(res)
LBEplot(res,plot.type="main")
LBEplot(res,plot.type="main",legend=FALSE)
## end