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MPINet (version 1.0)

The package can implement the network-based metabolite pathway identification of pathways.

Description

(1) Our system provides a network-based strategies for metabolite pathway identification.(2) The MPINet can support the identification of pathways using Hypergeometric test based on metabolite set. (3)MPINet can support pathways from multiple databases.

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Version

Install

install.packages('MPINet')

Monthly Downloads

20

Version

1.0

License

GPL (>= 2)

Maintainer

Yanjun Xu

Last Published

July 28th, 2013

Functions in MPINet (1.0)

getPSS

Evaluate the CGNB score of metabolites
MPINetData

The variables in the environment variable MPINetData of the system
MPINet-internal

MPINet internal functions
ExampleData

The example data in the environment variable of the system
printGraph

Print the results of identification
identifypathway

A novel pathway identification approach based on metabolite set
GetExampleData

Get the example data set