MPINet (version 1.0)

GetExampleData: Get the example data set

Description

Get the example data set.

Usage

GetExampleData(dataset)

Arguments

dataset

A character string, must be one of "prostate" (default), "diabetes1" and "diabetes2".

Value

A character vector of interesting metabolites, for each element is a pubchem CID

Details

The example data are obtained from the environment variable MPINetData.

References

Sreekumar, A., Poisson, L.M., Rajendiran, T.M., Khan, A.P., Cao, Q., Yu, J., Laxman, B., Mehra, R., Lonigro, R.J., Li, Y. et al. (2009) Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. Nature, 457, 910-914.

Suhre, K., Meisinger, C., Doring, A., Altmaier, E., Belcredi, P., Gieger, C., Chang, D., Milburn, M.V., Gall, W.E., Weinberger, K.M. et al. (2010) Metabolic footprint of diabetes: a multiplatform metabolomics study in an epidemiological setting. PLoS ONE, 5, e13953.

Examples

## Not run: 
# 
# #obtain the metastatic prosate cancer data set
# Exampledata<-GetExampleData(dataset="prostate")
# head(Exampledata)
# 
# ## End(Not run)