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RNOmni (version 0.6.0)

Rank Normal Transformation Omnibus Test

Description

Implementation of genetic association tests that incorporate the rank-based inverse normal transformation (INT). These tests are broadly indicated for traits with continuous residual distributions. In the presence of non-normal residuals, INT-based tests robustly control the type I error, whereas standard linear regression may not. Moreover, INT-based tests dominate standard linear regression in terms of power. There are two main strategies for incorporating the INT in association analysis. In direct INT (D-INT), the trait is directly transformed. In indirect INT (I-INT), residuals are formed prior to transformation. Neither D-INT nor I-INT is uniformly most powerful. The INT omnibus test (O-INT) adaptively combines D-INT and I-INT into a single robust and statistically powerful approach.

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Version

Install

install.packages('RNOmni')

Monthly Downloads

1,262

Version

0.6.0

License

GPL-3

Maintainer

Zachary McCaw

Last Published

January 12th, 2019

Functions in RNOmni (0.6.0)

fitOLS

Univariate OLS model.
matInv

Matrix Inverse
matIP

Matrix Inner Product
rankNorm

Rank-Normalize
DINT

Direct-INT
BootCorr

Bootstrap Correlation Estimate.
IINT

Indirect-INT
OINT

Omnibus-INT
SchurC

Schur complement
cov

Correlation
OmniP

Omnibus P-value
RNOmni-help

RNOmni: Rank-Normal Omnibus Association Testing
AvgCorr

Average Correlation Estimate.
BAT

Basic Association Test