objectToHTML

objectToHTML-methods

objectToHTML,ANY-method

objectToHTML,character-method

objectToHTML,data.frame-method

objectToHTML,ggbio-method

objectToHTML,ggplot-method

objectToHTML,recordedplot-method

objectToHTML,trellis-method

objectToHTML,XMLInternalNode-method


 Unless overridden by a .toHTML argument, this function is called to
 transform objects being published into HTML form before they are
 inserted into a report.


 report 

 html 

 publish 

The ReportingTools software package enables users to
easily display reports of analysis results generated from
sources such as microarray and sequencing data.  The package
allows users to create HTML pages that may be viewed on a web
browser such as Safari, or in other formats readable by
programs such as Excel.  Users can generate tables with
sortable and filterable columns, make and display plots, and
link table entries to other data sources such as NCBI or larger
plots within the HTML page.  Using the package, users can also
produce a table of contents page to link various reports
together for a particular project that can be viewed in a web
browser.  For more examples, please visit our site: http://
research-pub.gene.com/ReportingTools.

Jason A Hackney

ReportingTools

Tools for making reports in various formats

objectToHTML-methods function

<dl> <dt><code>signature(object = "ANY")</code></dt><dd>
  The default method for objectToHTML calls toReportDF (or the
  overriding .toDF) then modifyReportDF (or the overriding
  .modifyDF) to create a data.frame to be published. The data.frame
  method of objectToHTML is then called. </dd> <dt><code>signature(object = "character")</code></dt><dd>
  If the character vector contains HTML code (determined by attempted
  parsing), it is parsed but otherwise unchanged. If not, it is added as
  content to a new <p> HTML node.
</p></dd> <dt><code>signature(object = "data.frame")</code></dt><dd>
  The data.frame is transformed into a filterable, sortable HTML table
</dd> <dt><code>signature(object = "ggbio")</code></dt><dd>
  The graphic is written to the report's figure directory and an <image>
  tag to display the image is returned
</image></dd> <dt><code>signature(object = "ggplot")</code></dt><dd>
  The graphic is written to the report's figure directory and an <image>
  tag to display the image is returned
</image></dd> <dt><code>signature(object = "recordedplot")</code></dt><dd>
  The graphic is written to the report's figure directory and an <image>
  tag to display the image is returned
</image></dd> <dt><code>signature(object = "trellis")</code></dt><dd>
  The graphic is written to the report's figure directory and an <image>
  tag to display the image is returned
</image></dd> </dl>

Methods

Unless overridden by a .toHTML argument, this function is called to
 transform objects being published into HTML form before they are
 inserted into a report.

Transform R objects into HTML form to be inserted in HTML reports

objectToHTML-methods: Transform R objects into HTML form to be inserted in HTML reports

Description

Arguments

Methods