Seurat (version 2.0.0)

CellCycleScoring: Score cell cycle phases

Description

Score cell cycle phases

Usage

CellCycleScoring(object, g2m.genes, s.genes, set.ident = FALSE)

Arguments

object

A Seurat object

g2m.genes

A vector of genes associated with G2M phase

s.genes

A vector of genes associated with S phases

set.ident

If true, sets identity to phase assignments Stashes old identities in 'old.ident'

Value

A Seurat object with the following columns added to [e-mail]: S.Score, G2M.Score, and Phase

See Also

AddModuleScore