Seurat (version 2.0.0)

DimTopGenes: Find genes with highest scores for a given dimensional reduction technique

Description

Return a list of genes with the strongest contribution to a set of components

Usage

DimTopGenes(object, dim.use = 1, reduction.type = "pca", num.genes = 30,
  use.full = FALSE, do.balanced = FALSE)

Arguments

object

Seurat object

reduction.type

Dimensional reduction to find the highest score for

num.genes

Number of genes to return

use.full

Use the full PCA (projected PCA). Default i s FALSE

do.balanced

Return an equal number of genes with both + and - scores.

pc.use

Components to use

Value

Returns a vector of genes