Seurat (version 2.1.0)

AverageDetectionRate: Probability of detection by identity class

Description

For each gene, calculates the probability of detection for each identity class.

Usage

AverageDetectionRate(object, thresh.min = 0)

Arguments

object

Seurat object

thresh.min

Minimum threshold to define 'detected' (log-scale)

Value

Returns a matrix with genes as rows, identity classes as columns.

Examples

# NOT RUN {
head(AverageDetectionRate(object = pbmc_small))

# }