TestDimorph
Analysis Of The Interpopulation Difference In Degree of Sexual Dimorphism Using Summary Statistics
Installation
You can install the released version of TestDimorph from CRAN with:
install.packages("TestDimorph")
Data entry
The input can be in the form of wide format raw data or summary statistics where each row represents measurements of a single individual or population. In order to be recognized by the functions, columns need to have specific names (case sensitive):
- Sex : either M for male or F for female (Raw data)
- Pop : studied populations (Summary/Raw data)
- Trait : studied traits or parameters (Summary)
- m : male sample size (Summary)
- f : female sample size (Summary)
- M.mu: male mean (Summary)
- F.mu : female mean (Summary)
- M.sdev : male standard deviation (Summary)
- F.sdev : female standard deviation (Summary)
N.B
- All non numerical values need to be factors.
- The list and the data frame formats for the
multivariate
andraw_gen
functions input, can be be found in the attached data sets under the namesbaboon.parms_list
andbaboon.parms_df
respectively.
Examples of data entry
Summary statistics for univariate analysis
Comparison of maximal femur length and mediolateral diameter in mid-shaft
Pop | m | M.mu | M.sdev | f | F.mu | F.sdev |
---|---|---|---|---|---|---|
Turkish | 150 | 49.39 | 3.01 | 150 | 42.91 | 2.90 |
Bulgarian | 82 | 48.33 | 2.53 | 58 | 42.89 | 2.84 |
Summary statistics for multivariate analysis and raw data generation
Comparison of maximal femur length and mediolateral diameter in mid-shaft
Pop | Trait | m | M.mu | M.sdev | f | F.mu | F.sdev |
---|---|---|---|---|---|---|---|
Bulgarian | MXFL | 82 | 461.80 | 19.90 | 58 | 411.70 | 23.20 |
Greek | MXFL | 36 | 440.40 | 19.60 | 34 | 409.80 | 21.40 |
Bulgarian | MLD | 82 | 27.67 | 2.21 | 58 | 24.89 | 1.78 |
Greek | MLD | 36 | 27.74 | 1.79 | 34 | 26.69 | 2.42 |
Raw data for summary extraction
The Howells' craniometric data
Sex | Pop | GOL | NOL | BNL | BBH | XCB | XFB | ZYB | AUB |
---|---|---|---|---|---|---|---|---|---|
M | NORSE | 189 | 185 | 100 | 135 | 143 | 120 | 133 | 119 |
F | NORSE | 179 | 177 | 97 | 127 | 140 | 114 | 122 | 118 |
M | EGYPT | 192 | 190 | 104 | 132 | 140 | 116 | 134 | 125 |
F | EGYPT | 174 | 172 | 93 | 123 | 140 | 118 | 121 | 114 |
Summary statistics for van_vark function
Howells summary data
Trait | Pop | M.mu | m | F.mu | f |
---|---|---|---|---|---|
GOL | EGYPT | 185.6207 | 58 | 175.5849 | 53 |
GOL | NORSE | 188.4727 | 55 | 179.9818 | 55 |
NOL | EGYPT | 183.569 | 58 | 175.0377 | 53 |
NOL | NORSE | 186.1818 | 55 | 178.6909 | 55 |