updateApdHeader.default

updateApdHeader

Updates the header of an Affymetrix probe data (APD) file.

file

DEPRECATED. Do not start building new projects based on this package. (The (in-house) APD file format was initially developed to store Affymetrix probe-level data, e.g. normalized CEL intensities.  Chip types can be added to APD file and similar to methods in the affxparser package, this package provides methods to read APDs organized by units (probesets).  In addition, the probe elements can be arranged optimally such that the elements are guaranteed to be read in order when, for instance, data is read unit by unit.  This speeds up the read substantially.  This package is supporting the Aroma framework and should not be used elsewhere.)

Henrik Bengtsson

aroma.apd

A Probe-Level Data File Format Used by 'aroma.affymetrix'
[deprecated]

updateApdHeader function

<dl> <dt>filename</dt>
<dd>The filename of the APD file.</dd> <dt>path</dt>
<dd>The path to the APD file.</dd> <dt>...</dt>
<dd>A set of named header values to be updated/added to the
 header. A value of <code><a href="/link/NULL?package=aroma.apd&version=0.7.0" data-mini-rdoc="aroma.apd::NULL">NULL</a></code> will be removed from the current header.</dd> <dt>verbose</dt>
<dd>See <code>Verbose</code>.</dd></dl>

Arguments

Author

Updates the header of an Affymetrix probe data (APD) file — updateApdHeader

<dl>

 <dt>filename</dt>
<dd>The filename of the APD file.</dd>

 <dt>path</dt>
<dd>The path to the APD file.</dd>

 <dt>...</dt>
<dd>A set of named header values to be updated/added to the
 header. A value of <code><a href='https://rdrr.io/r/base/NULL.html'>NULL</a></code> will be removed from the current header.</dd>

 <dt>verbose</dt>
<dd>See <code>Verbose</code>.</dd>

</dl>

updateApdHeader: Updates the header of an Affymetrix probe data (APD) file

Description

Usage

Value

Arguments

Author

See Also