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bamboo (version 0.9.25)

Protein Secondary Structure Prediction Using the Bamboo Method

Description

Implementation of the Bamboo methods described in Li, Dahl, Vannucci, Joo, and Tsai (2014) .

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Install

install.packages('bamboo')

Monthly Downloads

106

Version

0.9.25

License

GPL-3

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Repository

https://github.com/dbdahl/bamboo

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Last Published

April 2nd, 2020

Functions in bamboo (0.9.25)

bamboo.training

Training Dataset

bamboo.validation.astral30

Validation (Test) Dataset named astral30

bamboo.validation.casp9

Validation (Test) Dataset Named casp9

bamboo.MSA.casp9

MSA Information for the bamboo.validation.casp9 Test Dataset

bamboo.MSA.astral30

MSA Information for the bamboo.validation.astral30 Test Dataset

bamboo.estimate

Bayesian Model of Protein Primary Sequence for Secondary Structure Prediction